Pairwise Alignments

Query, 548 a.a., nuclease from Pseudomonas simiae WCS417

Subject, 600 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  213 bits (542), Expect = 2e-59
 Identities = 185/591 (31%), Positives = 267/591 (45%), Gaps = 57/591 (9%)

Query: 1   MANPLEDPLYYLHNFRQVLHWLGLRYADLLDADEQHFIQQFDRLPQPSQALLVRMVMRKG 60
           MAN L+DP YYL +F  +L+ LG RY DLL  +E       + LP  +  LLVR++ R+G
Sbjct: 1   MANTLDDPDYYLRHFSVLLNGLG-RYRDLLSENELKLQDCPNTLPSGALRLLVRLLSRRG 59

Query: 61  VHFRAGKLNYVEIGCTHTAAAPLLELGWVDT---------QFLLAFEELFALLQKGEILG 111
            +FR  KL+Y +I     A A L + G++             L+   EL A + K + +G
Sbjct: 60  GYFRISKLSYPDIPELAQACAELEQQGFITLGESPEPGILSSLITRNELAAAISKLQPVG 119

Query: 112 ---------AFKPWIDQPKGRKSDWLQGLSAH-----FTDRRS-FAGWCPELADTLYSLS 156
                    + K   D P   K+   Q L AH       D  + + G   +  D +  L 
Sbjct: 120 IEEDVDTRASAKHPHDSPP-LKTATKQQLIAHADTTLLADGTTLWTGIARQFRDDVLRLD 178

Query: 157 IMELCDRLRLMFFGNLHQDWSEFVLADLGIYTYEKVEFCAESRGLRSRDDVHGFLFLHQC 216
                D LRL++FGN  Q   EFV+ +LG   YE       +R   +R +V   L     
Sbjct: 179 ATAAYDTLRLLYFGNAWQQSDEFVVTELGYRRYEDYRLDEANRRFDTRHEVELALLCADV 238

Query: 217 QQAFEAG--------ETLEQVLAQIATLSTDNPWLAKRRAKLLFQIGQQCERIAELA--- 265
            QA E          E L +VL    +      + A+ + + L   G+Q  ++  L    
Sbjct: 239 AQALEDTRQLPLATLEDLVEVLKSQLSSCVSLEFSAEPKPQFLCDTGRQGRKLGHLLSRI 298

Query: 266 --------LAEQ---IYRTCAYPGARSRLIRVLERQEDYGQAMALANAAQQAPESAAEQQ 314
                   L EQ   +Y+      AR R +R LE    Y +A   A A  ++P +  E  
Sbjct: 299 AREYERRDLTEQALFLYQGLELVPARERRVRCLEALGRYQEAFHGAKALFESPLADEEYH 358

Query: 315 HLLRVVPRLRRKLGKPALPKAQPRAVTRLDLALALPEPLMSVEYCVQAHLSEPDGPVHYV 374
             LR++PRL +K G        P +++   L LA       VEY    H         ++
Sbjct: 359 ASLRMLPRLAKKAGL-RWHNLAPLSLSEQKLELAAKP---GVEYAALKHFDAQGIAGWHL 414

Query: 375 ENGLINSLFGLLCWDVIFAPLPGSFFHPFQRGPADLHSEDFRPRR-APLFAACFEQLQDE 433
           EN     LFGL  WD++FAP+ G+F HPFQ  P+D++  +F  RR A L    F   Q +
Sbjct: 415 ENAFSCGLFGLALWDILFAPVKGAFDHPFQTAPSDMYQPEFSQRRQAMLDERLFALNQGD 474

Query: 434 RYKTTIRQRYSDKWGIQSPFVFWNLLSEDLLEQALACLPAEHLRYWFERLLLDIRANRAG 493
              + + + +  K GI + +V W L SE LL   L  L    +    ERLL D+RA R+G
Sbjct: 475 --LSMLSRHFHRKHGIANDWVNWTLWSETLLTSLLPYLTGPFVASLVERLLQDLRARRSG 532

Query: 494 MPDLIQFWPTQKTYRMIEVKGPGDRLQDNQLRWLEFCSEYQMPVTVCYVRW 544
            PDL+     Q  +  +EVKGPGDRL D+Q  WL +    +M   V +V W
Sbjct: 533 FPDLVLIRDGQLAF--VEVKGPGDRLADHQKDWLSWLGNKEMASEVLWVTW 581