Pairwise Alignments

Query, 985 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 818 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.4 bits (228), Expect = 1e-22
 Identities = 92/322 (28%), Positives = 143/322 (44%), Gaps = 57/322 (17%)

Query: 44  FQSDWGLGR-----------MKADEAYAAGITGSGVKIGALDSGFDPNHPEASRDRY-HA 91
           F S WG+             + A EA+      S V IG +D+G D NHP+   + + +A
Sbjct: 107 FASLWGMNNTGQSGGTADADIDAPEAWEITTGSSDVVIGVIDTGVDYNHPDLQANMWVNA 166

Query: 92  VSASGSYVDGSAFSTT------GALNPNND-----SHGTHVTGTMGA-ARDGVGMHGVAY 139
              +G+ +D  A           A+N N +      HGTHV+GT+GA   +GVG+ GV +
Sbjct: 167 GEIAGNGIDDDANGVIDDIHGYSAVNNNGNPMDGNGHGTHVSGTIGAKGNNGVGVVGVNW 226

Query: 140 NAQLYVGNTNANDSFLFGPTPDPKYFKAVYSAL-VDSGV--RAINNSWGSQPKDVSYRTL 196
           + +  +      D+  +G T         ++ L V+ GV  +A NNSWG           
Sbjct: 227 DVK--IAGCQFLDTDGYGSTAGAIACIDYFTNLKVNHGVDIKATNNSWGG---------- 274

Query: 197 ADLHAAYAQHYNQGTWLDAAADVAKAGVINVFSAGNSGYANASVRSALPYFQPELEGHWL 256
                 ++Q        DA     +AG++ V +AGN    N     A P++ P      +
Sbjct: 275 ----GGFSQALK-----DAIEAGGEAGILFVAAAGNDAVDN----DASPHY-PSSYNSDV 320

Query: 257 AVSGLDKANNQK---YNQCGIAKYWCISTPGALINSTIPDGGYGVKSGTSMSAPHATGAL 313
             S      N +   ++Q G+     +  PG+ I ST+  GGY   SGTSM+ PH TGA 
Sbjct: 321 VFSIASTTRNDRMSDFSQWGLTSV-DMGAPGSAILSTVRGGGYATYSGTSMATPHVTGAA 379

Query: 314 ALVMERYPYMTNEQALQVLLTT 335
           ALV    P +T  +  ++L+ +
Sbjct: 380 ALVWALNPDLTPVEMKELLMAS 401