Pairwise Alignments

Query, 433 a.a., hemolysin D from Pseudomonas simiae WCS417

Subject, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  118 bits (296), Expect = 3e-31
 Identities = 103/433 (23%), Positives = 198/433 (45%), Gaps = 13/433 (3%)

Query: 4   ITFEQRDANFFARMGWLLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTLSPG 63
           +   QR  + FAR+  L   +G     LWA    LD      G +VVSG+ + +Q+    
Sbjct: 43  LALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQS 102

Query: 64  VVSRILVKEGERVKQGQPLFRLDQTQHQADVQSLQAQYRMAWASVARWQSERDNRASILF 123
            +  I V++G+RV++G PL  LD      D+  L +Q       + R+++  +++  +  
Sbjct: 103 RLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQL-LTH 161

Query: 124 PPELSANPDPALALVLE---GQRQLFSSRREAFAREQAGIRANIDGATAQLNGMRRARSD 180
            P  +A P    AL+ E    ++  F S   +   E    R +     + ++ + +   +
Sbjct: 162 DPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTEN 221

Query: 181 LTAQAQSLRDQLSNLQPLADNGYIPRNR-LMDYQRQLSQVQQDLAQNTGESGRVEQGILE 239
           + +Q  + R +L+ ++ +    Y+ + + L++ QRQ++Q + +L     +   +E+ +  
Sbjct: 222 I-SQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTG 280

Query: 240 SRLKLQQHSEEYQKEVRSQLADSQLRSLTLEQQLTSAGFDLQHSEINAPADGIAVNLSVH 299
            + + Q+   E +++ R QLA       +L Q+L+      Q   I +P DG    LSV+
Sbjct: 281 FKAQKQREWLEKRRQARLQLA-------SLNQELSKVREREQLEIIRSPVDGTVQQLSVY 333

Query: 300 TEGAVVRAGETLLEIVPQDTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGE 359
           T GAV++  + L+ IVP++   + E  +    V  V     V +   AF  +R   +  E
Sbjct: 334 TLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAE 393

Query: 360 VSLISADQMLDEKTGAPYYVLRTTVSEAALEKLHGLVIKPGMPAEMFVRTGERSLLNYLF 419
           +  IS D   DE+ G  +       +   +     + + PGM     ++T +R +++YL 
Sbjct: 394 LLSISRDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLL 453

Query: 420 KPLLDRAGSALTE 432
            P+ +    AL E
Sbjct: 454 SPIQEYQAEALRE 466