Pairwise Alignments

Query, 583 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (424), Expect = 8e-46
 Identities = 146/560 (26%), Positives = 262/560 (46%), Gaps = 23/560 (4%)

Query: 11  FKALGEYKRILISVGCFTALINLLM-LVPSIYMLQVY----DRVLSSQNETTLVMLTLMV 65
           FK L  Y R L   G   + I L++      YM+ +     D    +     L +L  M+
Sbjct: 13  FKRLWTYIR-LYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMI 71

Query: 66  VGFFAFIGTLEAIRSFIVIRIGSQLERRFNLRVYKAAFERNLQR-GQGHAGQSLGDLTHI 124
           +G     G      S+ +  +   +  +   R++       ++   Q   G  L  +T+ 
Sbjct: 72  LGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYD 131

Query: 125 RQFITGP---ALFAFFDAPWFPLYLFVIFLFNVWLG--VLATAGAVLLIGLACLNEYLTK 179
            + + G    AL +        + L  +  +N W    VL     V+   ++ +++   K
Sbjct: 132 SEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRK 191

Query: 180 --KPLGEASGYSQQSTQLATSHLHNAETIQAMGMLGALRQRWFAVHSQFLGLQNQASDTG 237
             + +  A G+   S   A   L   + + + G     R+R+  V +       +     
Sbjct: 192 ISRNMQTAMGHVTSS---AEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQ 248

Query: 238 SVVTSLSKSLRLCLQSLVLGLGALLVIRGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQW 297
           S+   + + +       VL L ++  IR ++T G        M  ++ P+  L +V  ++
Sbjct: 249 SIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEF 308

Query: 298 SSAKLAYQRLDDLLREFPPEVEQMKLPAPK--GQVSFEQVSAGPPGRRVATLHQVSFNLV 355
                A Q L  L+ +   E +  K  A +  G+V  + V+    G+    L  VSF++ 
Sbjct: 309 QRGMAACQTLFGLM-DLETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIP 367

Query: 356 AGEVLGVLGASGSGKSTLARVLVGVWPTLAGTVRLDGADIHRWDRDDLGPHIGYLPQDIE 415
            G+ + ++G SGSGKST+A +    +   +G++ LDG D+  +   +L  H   + Q++ 
Sbjct: 368 QGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVH 427

Query: 416 LFSGSIADNIARFRQAD--PESVVRAAQQAGVHELILRLPQGYDTVLGDNGGGLSGGQKQ 473
           LF+ +IA+NIA   + +   E + +AA+QA   E I  +PQG DTV+G+NG  LSGGQ+Q
Sbjct: 428 LFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQ 487

Query: 474 RVALARALYGGPRLIVLDEPNSNLDTVGEAALASAIVQMKAQGSSVVLVTHRSSALAQAD 533
           RVA+ARAL     +++LDE  S LDT  E A+ +A+ +++ +  +V+++ HR S + QAD
Sbjct: 488 RVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQ-KNKTVLVIAHRLSTIEQAD 546

Query: 534 KLLVLSEGHLQAFGPSQEVL 553
           ++LV+ EG +   G   ++L
Sbjct: 547 EILVVDEGEIIERGRHADLL 566