Pairwise Alignments

Query, 583 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 726 a.a., toxin secretion ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  226 bits (577), Expect = 2e-63
 Identities = 149/537 (27%), Positives = 272/537 (50%), Gaps = 8/537 (1%)

Query: 28  TALINLLMLVPSIYMLQVYDRVLSSQNETTLVMLTLMVVGFFAFIGTLEAIRSFIVIRIG 87
           + L+N+  LV  ++++ VYD+V+ +    +L +L +     + F   +  +RS+++   G
Sbjct: 180 SVLVNIFALVSPLFIMNVYDKVVPNLAFDSLWVLAIGASIAYLFDLVMRQLRSYLIDVAG 239

Query: 88  SQLERRFNLRVYKAAFERNLQRGQ---GHAGQSLGDLTHIRQFITGPALFAFFDAPWFPL 144
            +++   + R++  A    L++     G   + LG+   IR+ +T   +    D P+   
Sbjct: 240 KKVDIIVSSRLFAKAIGIPLEKRSPSIGGMAKQLGEFDSIREILTSATITTLVDLPFALF 299

Query: 145 YLFVIFLFNVWLGVLATAGAVLLIGLACLNEYLTKKPLGEASGYSQQSTQLATSHLHNAE 204
           +L VI++    L V+   G +++IG     +   K  + E + +S          L   E
Sbjct: 300 FLIVIYIVAGDLAVIPVVGGMIIIGFTLYTQPKLKAAIEEGNKFSSLKHGHLIESLSALE 359

Query: 205 TIQAMGMLGALRQRWFAVHSQFLGLQNQASDTGSVVTSLSKSLRLCLQSLVLGLGALLVI 264
           +I+A G  G +++ W  +       Q ++    + V++ +  +       V+ LG   V 
Sbjct: 360 SIKANGAEGIVQKSWQQMIGHSANWQLKSKKLSNSVSNTANFIVQFTVVCVVILGVYRVS 419

Query: 265 RGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQWSSAKLAYQRLDDLLR---EFPPEVEQM 321
              ++ G +IA  +L  R ++P+ QL  +  + +    A ++L++L+    EF  +   +
Sbjct: 420 DNLISMGGIIAAVMLSSRAIAPMAQLAGLMTRANHTASALRQLNELMLQEDEFENKGHLV 479

Query: 322 KLPAPKGQVSFEQVSAGPPGRRVATLHQVSFNLVAGEVLGVLGASGSGKSTLARVLVGVW 381
                 G+++ + V    PG     LH +S  +  GE + ++G +GSGKSTLA++LVG++
Sbjct: 480 SKQRLIGKINADHVGFSYPGSEKPVLHPLSLTINPGERIAIIGRNGSGKSTLAKLLVGLF 539

Query: 382 PTLAGTVRLDGADIHRWDRDDLGPHIGYLPQDIELFSGSIADNIA-RFRQADPESVVRAA 440
               G++R DG D  +    DL  + GYLPQD+ LF G+I DNI    RQ     ++RA 
Sbjct: 540 QPTTGSLRYDGVDSAQIHPSDLRRNFGYLPQDVTLFHGTIRDNILFGTRQVTEHQLIRAV 599

Query: 441 QQAGVHELILRLPQGYDTVLGDNGGGLSGGQKQRVALARALYGGPRLIVLDEPNSNLDTV 500
           Q +GV +      +G D  +G+ G  LS GQ+Q VALARA    P ++++DEP ++LD  
Sbjct: 600 QLSGVSQFTHLEAEGLDQQVGEGGMSLSRGQRQTVALARATLNDPPVLLMDEPTASLDAR 659

Query: 501 GEAALASAIVQMKAQGSSVVLVTHRSSALAQADKLLVLSEGHLQAFGPSQEVLRALS 557
            E     + +Q  ++  +++L+TH+   L   D+++VL  GH+ A GP  EVL  L+
Sbjct: 660 AEQQFIRS-MQNVSKDRTLLLITHKMHLLQLVDRIIVLERGHVVADGPKAEVLEKLN 715