Pairwise Alignments

Query, 815 a.a., helicase UvrD from Pseudomonas simiae WCS417

Subject, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 7e-16
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 23/167 (13%)

Query: 531 HLMIDEFQDVSPQIVSWIRASLREIRSRGPAIHIGRGAQRSSLLCVGDDWQSIYGWRGSS 590
           H+++DEFQD +    +W+R                 GAQ S+++ VGDD QSIYGWRG+ 
Sbjct: 216 HILVDEFQDTNAIQYAWLRMMA--------------GAQ-SNVMIVGDDDQSIYGWRGAR 260

Query: 591 PKYFMAFDKEFPSPSTTRVMLGENYRSHQHIIDAAEHIVRAAPAIPGKKAKASGAPQALV 650
            +    F +EFPS +T R  L +NYRS + I++A+  ++       GK+    G     +
Sbjct: 261 VENIEKFTREFPSVNTIR--LEQNYRSTKTILEASNTLIANNSERMGKQLWTDGLVGEPI 318

Query: 651 PV--KVLERDDAALGRQLSEHYQKGDSIL----MLYRKSSDKSLIEE 691
            V     E D+A       + +Q+    L    +LYR ++   ++EE
Sbjct: 319 SVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQSRVLEE 365



 Score = 33.5 bits (75), Expect = 4e-05
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 16/71 (22%)

Query: 713 LTYHSAKGLQADAVFMLGDCQHVTSSPYKNQVYRMAGLGNAGDSEPYDNAQKDEVLRLAY 772
           +T HSAKGL+   VFM+G    V    + +Q+               +  + +E  RL Y
Sbjct: 557 MTLHSAKGLEFPLVFMVG----VEEGMFPSQM------------SAEEAGRLEEERRLCY 600

Query: 773 VGITRAVSHCY 783
           VG+TRA+   Y
Sbjct: 601 VGMTRAMQKLY 611



 Score = 31.6 bits (70), Expect = 2e-04
 Identities = 17/53 (32%), Positives = 30/53 (56%)

Query: 145 VIAGAGAGKSTSLVLRILLLTHYLGFELSSMTVVTFTRESRKDFINKLMEILN 197
           ++AGAG+GK+  LV RI  L         S+  VTFT ++  +   ++ E+++
Sbjct: 28  ILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKAAAEMRGRIEELMH 80