Pairwise Alignments

Query, 468 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 470 a.a., GntR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  126 bits (317), Expect = 1e-33
 Identities = 124/467 (26%), Positives = 206/467 (44%), Gaps = 16/467 (3%)

Query: 13  YQAVYRYMINLINEVSTDTRVKLPSLRQLAGRLNVSISTVQYAYSLLEKEGRVYSVAKSG 72
           YQ + + + N I++       KLPSLRQ      +S+ TV  AY LLE +G + + AKSG
Sbjct: 4   YQQLAQDLKNRISQGVWQAGDKLPSLRQTVTDSGLSLMTVLNAYQLLESQGVILAQAKSG 63

Query: 73  YYAWPL-SANPLAGTS-----GDPLD------RLYAAARRPGMVVLSGDEPALLASLDGT 120
           Y   P   A     T       D LD       +  A+++ G+V      P         
Sbjct: 64  YIVAPQPEAFRYPETQRQIYFSDRLDINEFVFNVLQASKQAGIVPFGSAFPDPSLFPQQA 123

Query: 121 LLRLERELVRQYPRYLQPWSQPCGVWELRAALAARYTSSPTRCWQADDVYIGPDLRGVLD 180
           L R   ++ RQ        + P G   LR A++ RY          D++ I       L+
Sbjct: 124 LARSLVKVTRQMSPSFAADNLPPGNAGLRKAISQRYAKLGMSV-APDEILITSGAMEALN 182

Query: 181 ILIEVLGLRGAPVIVESPCDWLVLRLLQDAGVRVIELPWTPDGRLDLVNLDHLLSAESVR 240
           + +  L   G  V++ESP  +  ++ ++   +R I +   P   +DL  L  +L    V+
Sbjct: 183 LSLAALAQAGDWVVIESPTFYGAMQAIERLKLRAIAVATDPREGIDLNALAEVLKTYPVK 242

Query: 241 LVLLSSRVSLPAGVSMPPQDRLALAQLLDQYGCWLLENDTFGEL--GFDEPQAALRELVN 298
              L S    P G S+  Q + A+ QLL ++   L+E+D + EL  G   P+  ++ L  
Sbjct: 243 ACWLMSLHQNPLGCSLSDQKKQAVYQLLCEHNVSLIEDDVYQELYVGSSAPRP-IKALDT 301

Query: 299 PERLMVFSSFEKVLGSEAPYGYLLSRRMNNELQRHFLLRSFRLSPIRQRAIARLYHSGRI 358
              ++   SF K L +    G++ + R   +LQR  L+ +   S   Q AIA    S + 
Sbjct: 302 QGCVLHCGSFSKSLIAGYRVGWVAAGRHAPQLQRLQLMSTLSTSAPMQLAIADFIQSPQY 361

Query: 359 DQHLRGLRLQLRLQADEMCERLDRDLSDQMTYRAPAAGAAFWLRSIRTVDMRQVFQRLLS 418
           ++HL+ LR  L  +   M + L   L + ++      G   WL     +D  Q++   L 
Sbjct: 362 ERHLKRLRHTLADRKFAMYQLLRAHLPESVSVNFEPGGYFLWLALPSHMDATQIYHSALE 421

Query: 419 QQVVIAPGELFSVNGLHQQHLRLSHTFQGQPDLNVVLAALSEALRQA 465
           + + IAPG LFS     +  +R++ ++   P+L   + AL++ L  +
Sbjct: 422 RGISIAPGNLFSNQAEFRHFMRINASYDCSPELVRAVKALAQILEHS 468