Pairwise Alignments

Query, 577 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  218 bits (556), Expect = 4e-61
 Identities = 152/475 (32%), Positives = 240/475 (50%), Gaps = 44/475 (9%)

Query: 110 TSGAVRKVVQDDLEDLHHLVAHHAVELTAAIVTPLAGLLWLATLNWRLALLAVLTLPIYA 169
           T+ AVR+ V   L+   +++ +     TA +V        LA  +WRL +  ++ L IY 
Sbjct: 148 TALAVRETVMKSLDVFVYVMVY----FTAIVVI-------LAQADWRLMIPMLIWLAIYV 196

Query: 170 VAYTLMMRGFGAKMQLLDKSMTRVSAAIVEFVHGIAVVKAFGQVGQAHRSYQQAVNQFSE 229
                 +            + + +S  IV+    I  VK F        S+ Q   Q++E
Sbjct: 197 TVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLF--------SHSQRETQYAE 248

Query: 230 Q----YAGWVRPLLRLEAFSSMALSVPVILLVSLGVGSLLLAYGWITPLELFAETLVAVV 285
           +    + G V   +RL    ++ + +   LLV     + L  Y WIT     +   +AV 
Sbjct: 249 EGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVF--TIAALSIYLWIT--SAISVGAIAVA 304

Query: 286 IPQSLLVINQSLTAQRTALAAADRIEALLD----------VEELPTPKACVQPQGSDIRF 335
           +  SL +   S        A  + I  ++D          V + P  K  V   G  I F
Sbjct: 305 VSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGG-ITF 363

Query: 336 EQVQFGYDAEHLILKGVDLHCPAGSVTALVGASGAGKSTLAKLVPRFHDVNAGRICVGGA 395
           + V F Y     ++  ++L+   G    LVG SGAGKSTL  L+ RFHDV +GRI + G 
Sbjct: 364 DDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQ 423

Query: 396 DVREIDPRQLYRHVGFVLQDAQLVHGTVADNLRLGRPDASDAEVVAAARSAQIHARIQAL 455
            + E+    L   +G V QD  L+H ++ DN+  G P+A++ +++ A   A  H  I  L
Sbjct: 424 PISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGL 483

Query: 456 P-----RGYQSVIGDDAV-FSGGEAQRVSIARTLLADTPVLILDEATSHADPESEALIQD 509
                  GY + +G+  V  SGG+ QR++I+R LL D P+L+LDEATS  D E EA IQ+
Sbjct: 484 TDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQE 543

Query: 510 ALSALARGRTVLVIAHRLASISGVDQIVVLDQGRVLESGCHEQLLKANGAYARMW 564
           +L+ L +G+TV+ IAHRL++I+ +D+++VLD+G+++E G H++L+  NG YA +W
Sbjct: 544 SLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLW 598