Pairwise Alignments

Query, 577 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  228 bits (582), Expect = 4e-64
 Identities = 158/540 (29%), Positives = 276/540 (51%), Gaps = 49/540 (9%)

Query: 52  QTLWLWAALVVIALSVGWMASGVALWLTHVADHRLQSSLREAMVHKLGRVPLGWYTDTTS 111
           + LW  AALV++ + +  +   + L  T + ++ +  S+R +    L +  +G++    +
Sbjct: 83  ERLWTMAALVLVVMPILALVHSMLLHQTILGNYPM--SIRWSTHRYLLKQSIGFFQRDFA 140

Query: 112 GAVRKVVQDDLEDLHHLVAHHAVELTAAIVTPLAGLLWLATLNWRLALLAVLTLPIYAVA 171
           G V   V  +   +   V    V+L+  I   +  +L +     ++ ++ +L   ++ +A
Sbjct: 141 GRVATKVMQNANSVRETVLK-LVDLSVYIAVYMVSMLVMIAEADKILVVPILVWLLFYIA 199

Query: 172 YTLMMRGFGAKMQLLD----KSMTRVSAAIVEFVHGIAVVKAFGQVGQAHRSYQQAVNQF 227
             +    F  +++ +      + ++++  IV+    I  VK F    +     +  + QF
Sbjct: 200 IQVY---FVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHSQRETTYAKSGMKQF 256

Query: 228 SEQYAGWVRPLLRLEAFSSMALSVPVI---LLVSLGVGSLLLAYGWITPLELFAETLVAV 284
                  +R L      +S+  SV +I   LL S+   S+ L   W+      AET+   
Sbjct: 257 LHTVYRQMRTL------TSLLYSVDLINYLLLFSIAALSIQL---WL------AETVTVG 301

Query: 285 VIPQSLLV--------------INQSLTAQRTALAAADRIEALLDVEELPTPKACVQPQG 330
           VI   + +              I     +  T + + + I   +++E+ P  K+ +Q + 
Sbjct: 302 VIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKS-LQVKF 360

Query: 331 SDIRFEQVQFGYDAEHLILKGVDLHCPAGSVTALVGASGAGKSTLAKLVPRFHDVNAGRI 390
            ++ F QV+FGY A+  +   ++L   AG    +VG SGAGKSTL  L+ RF+DV +G+I
Sbjct: 361 GELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQI 420

Query: 391 CVGGADVREIDPRQLYRHVGFVLQDAQLVHGTVADNLRLGRPDASDAEVVAAARSAQIHA 450
            + G D+  +    L RH+G + QD  L+H ++ DN+  G PDA  A +  AAR A  H 
Sbjct: 421 RIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHD 480

Query: 451 RIQALP-----RGYQSVIGDDAV-FSGGEAQRVSIARTLLADTPVLILDEATSHADPESE 504
            IQ L       GY   +G+  V  SGG+ QR++IAR LL + P+LI+DEATS  D E E
Sbjct: 481 FIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVE 540

Query: 505 ALIQDALSALARGRTVLVIAHRLASISGVDQIVVLDQGRVLESGCHEQLLKANGAYARMW 564
           + IQ+ L  L  G+TV+ IAHRL++I+ +D+++V+D+G+++E G H++LL   G YA++W
Sbjct: 541 SAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLW 600