Pairwise Alignments

Query, 581 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 592 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  250 bits (639), Expect = 1e-70
 Identities = 169/486 (34%), Positives = 253/486 (52%), Gaps = 14/486 (2%)

Query: 93  LGQHLVSLPLGWFNSEKVGRLSRSATSGTLMVTGLFAHYLGPVVSGVVVPATVALTLFVF 152
           + +HL++LP  +F  +  GRL+    S    +       L  +VS V +     +     
Sbjct: 106 VAEHLMTLPGAFFQGKDSGRLTHVFMSDVTQIEQFPGLILPRLVSLVGLSLAAVVAALWA 165

Query: 153 DWRLGLTAVLCAPLIYFAHHWSAAAIG------SNDARVEAAATLAGNRVVEFARYQQVL 206
           DWRLGL  VL A +   A      A+G      +  AR EA ATL  +R +EF     V+
Sbjct: 166 DWRLGL--VLGATI---ALGIGGLAVGERFQEKATAARAEAMATL-NSRTLEFLSGIHVI 219

Query: 207 RAFGRTQDGYAPLQAANQAQKQAGGSMLSQTFPKLLAGGLTVQLAFALLVGVGITLAAHG 266
           R+FG        L  A +  ++   ++ ++     +   L V +  A+++ + I   + G
Sbjct: 220 RSFGLGARRSLRLGEAIEGARKTSKALTARYVVAAILVPLIVAVGCAMVISLAILFLSLG 279

Query: 267 EIDAIQLVALLALAARFVGPLAEAAARSGLLRMAGNDLDQLVGILREPSLPEPVVSQPLS 326
            +D    +  + +  R   P+ +    S +L+       +L+ +L  P   E   + P  
Sbjct: 280 WMDPFGFLFFVFVCLRLTDPIRDLVDFSSILQQMVGSAGRLLDLLATPVEAEG--TSPAP 337

Query: 327 APGSLAFEQVSFAYPSGPTVLQDLTFSAPAHSMTAIVGASGSGKTTVTRLLMRFFDTTTG 386
           +  ++ FE+V FA+     +L  L+F     ++TA+VG +G+GKTT  RLL R +  T G
Sbjct: 338 SDRTVRFEEVGFAHGGEAPILDGLSFVLAPGTITALVGGTGAGKTTALRLLSRHWTPTKG 397

Query: 387 SVKVGGVDVREQSSEALMAQLSLVMQDVYLFDDSLEANIRVGSPDASARDVAEAARLAGV 446
            V VGGVD+   S  A    + +V Q V LF  S   NIR+  P A+  +V  AAR A  
Sbjct: 398 RVTVGGVDLSSLSRHAFSNLVGIVSQTVVLFSLSARDNIRLVRPQATDAEVERAARAARC 457

Query: 447 DEIVARLPQGWNTPVGEGGASLSGGERQRVSLARALLKRAPIVLLDEATAALDPHNEAFV 506
           D  +  +PQG++T +   GA+LSGGERQR++LAR  L+  PI+L DEAT+ALD  NE  V
Sbjct: 458 DGFIKAMPQGYDTLLVNAGATLSGGERQRLALARLFLRDCPILLFDEATSALDVENEHLV 517

Query: 507 QAAIQRLMQNSTVLVIAHRLPTIMAADQILVLDQGRLVESGTHAQLLSLNGRYAGFWHDR 566
           Q A+  L++  TVLV+AHRL TI  ADQILVLDQGR++E G H  L++  G Y   W   
Sbjct: 518 QEAMSELVRGRTVLVVAHRLWTIKGADQILVLDQGRIIERGDHDALIAAEGFYHQSWVAL 577

Query: 567 QRAGGW 572
           ++A GW
Sbjct: 578 EQAPGW 583