Pairwise Alignments

Query, 581 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  234 bits (597), Expect = 7e-66
 Identities = 158/479 (32%), Positives = 260/479 (54%), Gaps = 20/479 (4%)

Query: 96  HLVSLPLGWFNSEKVGRLSRSATSGTLMVTGLFAHYLGPVVSGVVVPATVALTLFVFDWR 155
           HL  L L +    + G LSR    GT  V+ L    +  +V  ++    +A+ + +F + 
Sbjct: 116 HLHRLDLDFHLERRTGGLSRDIERGTSGVSFLMRFMVFNIVPTLL---EIAMVIGIFFFN 172

Query: 156 LGLTAVLCAPLIYFAHHW-SAAAIGSNDARVEAAA---TLAGNRVVEFARYQQVLRAFGR 211
            G+       +   A+ W S  A       V  AA   +L+  R ++     + ++ F  
Sbjct: 173 YGVAFASITFISVLAYIWFSVIATEWRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNN 232

Query: 212 TQ-DGYAPLQAANQAQKQAGGSMLSQTFPKLLAGG--LTVQLAFALLVGVGITLAAHGEI 268
            + +     QA +Q +     + LS      L GG  L + +A   ++ +      H E+
Sbjct: 233 EKYESERYDQALDQWEVAKRKNRLSLF---ALNGGQALIIAIAMTAMMALAAYKVTHNEM 289

Query: 269 DAIQLVALLALAARFVGPLAEAAARSGLLRMAGNDLDQLVGIL-REPSL---PEPVVSQP 324
                V + A   +   PL         +R A  +++++  +L + PS+   P+ +  +P
Sbjct: 290 TLGDFVLINAFMMQLFMPLNFLGFVYREIRGALANIERMFSLLDKHPSIVDKPDALDFEP 349

Query: 325 LSAPGSLAFEQVSFAYPSGPTVLQDLTFSAPAHSMTAIVGASGSGKTTVTRLLMRFFDTT 384
               G L+FE VSF+Y   P +L++++F   A    A+VG SG+GK+T+ +LL RF+D  
Sbjct: 350 KR--GELSFENVSFSYDDRP-ILRNVSFKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVE 406

Query: 385 TGSVKVGGVDVREQSSEALMAQLSLVMQDVYLFDDSLEANIRVGSPDASARDVAEAARLA 444
            G + + G D+R+ + +AL   +++V QD  LF+DSL  NIR G P+AS  DV  A +LA
Sbjct: 407 QGRILIDGQDIRQLTQDALRRAIAIVPQDTVLFNDSLVENIRYGRPNASDDDVRHAIKLA 466

Query: 445 GVDEIVARLPQGWNTPVGEGGASLSGGERQRVSLARALLKRAPIVLLDEATAALDPHNEA 504
            +++ +A L QGW+T VGE G  LSGGE+QRV++ARA+LK +P+++ DEAT++LD  +E 
Sbjct: 467 HLEDFIASLSQGWDTKVGERGLKLSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQ 526

Query: 505 FVQAAIQRLMQNSTVLVIAHRLPTIMAADQILVLDQGRLVESGTHAQLLSLNGRYAGFW 563
            + +A++ + +  T LV+AHRL TI+ ADQI+VL +G +VE G H+ LL+ +G YA  W
Sbjct: 527 AILSALREVAKGHTSLVVAHRLSTIVDADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLW 585