Pairwise Alignments

Query, 304 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  129 bits (325), Expect = 6e-35
 Identities = 76/284 (26%), Positives = 137/284 (48%), Gaps = 10/284 (3%)

Query: 7   MLGLLALGSANVYADASCE-----TVKMADPGWSDIAATNAITGFLLTGMGYKPKVDTLA 61
           +LGL  + S  V +  S +     T+K   P W  +   + +   +L   GY  +++ L 
Sbjct: 11  LLGLAVMFSGCVQSPQSTDDTEKGTIKFGLPPWPGVTVKSNVVKVILEEQGYNVELNQLD 70

Query: 62  VPITFGGLKDGQVDVFLGNWMPAQQGFYDKFVANGDVVQLAK-NLDGTEFTLAVPDYVWD 120
             IT+  L DG +DV L  W+P     Y  +   G+ +++   N+  T   LAVP Y ++
Sbjct: 71  AGITYAKLADGDLDVSLAGWLPTTHEEY--WTQYGNQLEMVHVNVGKTALGLAVPTYTYE 128

Query: 121 AGVHDFADLNHYADKFDKKIYGIGSGAPANISLQEIIKKNDFELGQWKLVESSEQAMLAE 180
           AG+    DLN   + FD KI GI  GA    + ++ I  + + L  ++L  SS  AM+AE
Sbjct: 129 AGIQSITDLNGNEELFDGKIIGIEPGAGIMSNTEKAI--DSYSLSGYELQSSSTPAMMAE 186

Query: 181 VSRAVKKQKFVTFLGWTPHPMNVQLKMRYLKGGEKYFGDTGSVYTLTRKGYAQACPNVGK 240
           ++RA+ + + +    W PH +  +  ++ L   EK +GD   VYT+ R  +    P V +
Sbjct: 187 LARAINEDENIVVTVWEPHSVFFKFDIKMLDDPEKVYGDGDKVYTIARTDFKDDYPEVYE 246

Query: 241 LLTNLSFTQEMENSIMAEVANNKVSNADAAKAWIKANPAVLDKW 284
                     +++  + + ++  +   + A+ W+  NP +++ W
Sbjct: 247 FFQKFEVDPSVQSEWIYKYSDEGMDPEEVAEEWVANNPELVENW 290