Pairwise Alignments

Query, 413 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 413 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  155 bits (391), Expect = 3e-42
 Identities = 123/418 (29%), Positives = 195/418 (46%), Gaps = 39/418 (9%)

Query: 9   RFPLAVLAVVVMS--------ACGKTPEQAAAMPA-------AKVSVAKVLEQPVNEWDE 53
           R+ L +LAV  +         A  +TP++    P          V VAKV +     +++
Sbjct: 14  RWLLLILAVAAIGLLVWWLWPAPQETPQRPGGRPGFGAFGGPVPVRVAKVEQGEFEVFNK 73

Query: 54  FTGRLEAPETVQIRPRVSGQIDQVAFTEGALVKKGDLLFQIDPRPFQAEVRRLEAQLQQT 113
             G +    TV +R RV G++ ++ F EG  VKKGDLL  IDPRP++  +++ E  LQQ 
Sbjct: 74  ALGSVTPLNTVNLRSRVGGELVELRFEEGQRVKKGDLLAVIDPRPYKVALQQAEGTLQQN 133

Query: 114 RAAATRSDNEAQRGERLRQSNAISAELADSRTTAAQEARAAVAGIQAQLDLAKLNLSFTR 173
           RA    +  + +R   L   ++I+ +  D++     + +  +A  QA ++ A+LNL FT+
Sbjct: 134 RAQLKNAQVDFERYRGLFADDSIAKQTLDTQEALVSQYQGTLAANQASVNEARLNLEFTQ 193

Query: 174 VTSPISGRVSRAEITAGNLVTA-DVTALTSVVSTDKVYAYFDADERVFLKYTELARQGRR 232
           + SPI GRV   ++  GNLV A D T L  +  T  +   F   E   L      RQG +
Sbjct: 194 IRSPIDGRVGLRQLDVGNLVAANDTTPLVVITQTQPMSISFTLPEGDLLPVLTRYRQGDK 253

Query: 233 GATTPVYMG---LFNETGNPHQGQMNFVDNQVNPATGTIRGRAVFDNSKGEFTPGLYARL 289
            A      G   +F E      G +  +DNQ++  TGT+R +A FDN +    P  +  +
Sbjct: 254 LAVQIWDRGEKLMFGE------GLLESIDNQIDATTGTLRLKARFDNEQELLIPNQFVNV 307

Query: 290 KLVGSGTYSAVLINDEAVGTDLGKKFVLVM-EGDKPAYRSVELGPKIEGLRIVRSGLNKE 348
           +L       AVLI   A+       F  V+ E +K   R ++ GP      +V  GL   
Sbjct: 308 RLRVETLSDAVLIPSAALQFGSRGTFAYVVGEDNKVQLRLLKAGPSNGETTVVLEGLEVG 367

Query: 349 DTIVVKGLQRVRPGSPVAPETIPMASKETLAALAQQRQALEASNLEQVAPDKAAPKLA 406
           + +V++G  R+R G+ V               +  +R A EA+    +  D+AA + A
Sbjct: 368 ERVVMEGTDRLRDGAEV-------------EVVGSRRMAEEAAENPVLGGDEAAEREA 412