Pairwise Alignments

Query, 413 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 402 a.a., multidrug efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score =  262 bits (670), Expect = 1e-74
 Identities = 155/346 (44%), Positives = 203/346 (58%), Gaps = 7/346 (2%)

Query: 30  AAAMPAAKVSVAKVLEQPVNEWDEFTGRLEAPETVQIRPRVSGQIDQVAFTEGALVKKGD 89
           AA  PA  VSVAK   + +  W+ F+GRLEA E V+IRPRV G I    F EGALV+KGD
Sbjct: 46  AAVPPAVPVSVAKAESRRITTWESFSGRLEAIERVEIRPRVGGAILSAHFREGALVEKGD 105

Query: 90  LLFQIDPRPFQAEVRRLEAQLQQTRAAATRSDNEAQRGERLRQSNAISAELADSRTTAAQ 149
           LL  IDP PF A V R EAQ+    A    +  E +RG +L  ++AI     D R +   
Sbjct: 106 LLVTIDPEPFAAAVERAEAQVAAAEARVALARTELERGRKLVTTSAIPQSGVDQRLSVYD 165

Query: 150 EARAAVAGIQAQLDLAKLNLSFTRVTSPISGRVSRAEITAGNLVTADVTA--LTSVVSTD 207
           EARA +   +A L  AKL+L +T V +PISGRV R  +TAGNLVTA   +  LT++VS D
Sbjct: 166 EARANLRSAKAALHTAKLDLEYTEVRAPISGRVGRLNVTAGNLVTAGTASPVLTTLVSVD 225

Query: 208 KVYAYFDADERV----FLKYTELARQGRRGATTPVYMGLFNETGNPHQGQMNFVDNQVNP 263
            +YA F+  E V      K +  A         PV +G   + G P  G +  ++N+V+ 
Sbjct: 226 PIYASFNVSEEVVAAALAKLSASAGSIDAIERIPVEIGTSADEGTPITGHIQLINNEVDA 285

Query: 264 ATGTIRGRAVFDNSKGEFTPGLYARLKLVGSGTYSAVLINDEAVGTDLGKKFVLVMEGD- 322
           ATGTIR RA   N+ G   PG + R+++        ++I+D AV +D  KKFVLV+  D 
Sbjct: 286 ATGTIRVRAELTNADGRLIPGQFVRIRIGDPQPEEKLVISDRAVSSDQDKKFVLVVGADN 345

Query: 323 KPAYRSVELGPKIEGLRIVRSGLNKEDTIVVKGLQRVRPGSPVAPE 368
           K  YR V LGP  +GLRIV +GL   ++I+V GLQRVRPG  VAP+
Sbjct: 346 KVEYRQVTLGPVADGLRIVENGLKPGESIIVNGLQRVRPGVVVAPQ 391