Pairwise Alignments

Query, 341 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 343 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  548 bits (1413), Expect = e-161
 Identities = 271/336 (80%), Positives = 292/336 (86%)

Query: 1   MSEKDTISIHLVREALLQSCAPGAASAEVLHDAGIDPQWLAEPTARVSATTYARLWRLLA 60
           MS+KDTISI LVREALLQSCAPGAA+ EVL   GIDP  L +  ARV A  YARLWRLLA
Sbjct: 6   MSKKDTISIQLVREALLQSCAPGAATDEVLSKVGIDPALLDDAQARVPAHAYARLWRLLA 65

Query: 61  RRTDDEFFGMDPRKLKSGSLAFLCRAAMAQPTLATSLETALGFLSLMLERMPAELVRQQS 120
           RR DDEFFGMDPRKLKSGSLAFLC+ AMAQPTLA+ L   LGFLSLMLE +PA+ VRQQS
Sbjct: 66  RRLDDEFFGMDPRKLKSGSLAFLCQCAMAQPTLASGLTAGLGFLSLMLEHLPAQWVRQQS 125

Query: 121 LAEIVLVEPEAEPNRAFTYFTYWMIVHGVACWLAGRRIPILAIELRCAKPDFCADYQVMF 180
           LAEIVL+E + EP RAFTYFTYWMIVHGVACWLAGRRIPIL++ELRC  PDFC DY+VMF
Sbjct: 126 LAEIVLLEDDQEPRRAFTYFTYWMIVHGVACWLAGRRIPILSVELRCPAPDFCDDYRVMF 185

Query: 181 SDNLRFDRPRTRMIFSADCLDLPIKRTPEELKRFLAHAPANILVKYRDPDSLATRIKHDL 240
           S NLRFDRPRTRMIF+A+CLDLPI+R  +ELKRFLA APANILVKYRDP SLA+RI+HDL
Sbjct: 186 SQNLRFDRPRTRMIFAAECLDLPIRRNADELKRFLAQAPANILVKYRDPQSLASRIRHDL 245

Query: 241 RQLPPHTWPETEGLAVSLCISASTLRRRLAEEGQTYQGLKDSVRKELAIVWLAEPQISFA 300
           RQLP   WPETE LA  LC+SASTLRRRLAEEGQTYQGLKDSVRK+LAI WLAEP ISF 
Sbjct: 246 RQLPAEQWPETEALAQQLCVSASTLRRRLAEEGQTYQGLKDSVRKDLAITWLAEPSISFV 305

Query: 301 EIAERLGFADTSSFYKAFRKWSGSNPGHYRSLILNE 336
           EI  RLGFAD SSFYKAFRKWSGSNPGHYRSLILN+
Sbjct: 306 EITSRLGFADASSFYKAFRKWSGSNPGHYRSLILND 341