Pairwise Alignments

Query, 341 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 346 a.a., transcriptional regulator, AraC family from Pseudomonas syringae pv. syringae B728a

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 82/310 (26%), Positives = 135/310 (43%), Gaps = 11/310 (3%)

Query: 29  VLHDAGIDPQWLAEPTARVSATTYARLWRLLARRTDDEFFGMDPRKLKSGSLAFLCRAAM 88
           +L   G+DP  L++  AR+S   Y RL     + T     G+   +L   + A L     
Sbjct: 33  LLEQYGLDPIRLSQARARLSIPRYMRLGHAAIQLTGQPGLGLRMGQLSRFAQAGLAGITA 92

Query: 89  AQ-PTLATSLETALGFLSLMLERMPAELVRQQSLAEIVLVEPEAEPNRAFTYFTYWMIVH 147
           AQ P +  +  T + F  L       +    +      +      P  A+  F    I+ 
Sbjct: 93  AQAPNVREAARTLIRFEPLYGSNYRGQSSFHEDADGAWMRFYSISPYNAYNRFVVDSILA 152

Query: 148 GVACWL---AGRRIPILAIELRCAKPDFCADYQVMFSDNLRFDRPRTRMIFSADCLDLPI 204
           G    L   AG  +    +E+    PD+ A Y V+  + + F     ++      L L  
Sbjct: 153 GWLAQLSTLAGTELRAQRVEIEFEAPDYAAQYAVLSDNPMVFGAATNQLHLDQTSLAL-- 210

Query: 205 KRTPEELK---RFLAHAPANILVKYRDPDSLATRIKHDLRQL-PPHTWPETEGLAVSLCI 260
            R P+      R L     + L +     SL  RI   L  L    + P+ E +A  L +
Sbjct: 211 -RNPDHCPSTWRHLLQLCESELEQQTRTRSLRERIIQLLGPLLNGGSEPDLEEVAARLKL 269

Query: 261 SASTLRRRLAEEGQTYQGLKDSVRKELAIVWLAEPQISFAEIAERLGFADTSSFYKAFRK 320
              TLRR+LAEEG  ++ + +  R++LA+ ++ + +++F EIA  LGFA   +F +AF++
Sbjct: 270 PTWTLRRKLAEEGTCFRAVLNDTRRDLAMTYIRDTELAFGEIAYLLGFASAEAFQRAFKR 329

Query: 321 WSGSNPGHYR 330
           W+G  PG +R
Sbjct: 330 WNGQTPGEFR 339