Pairwise Alignments

Query, 341 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 339 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  122 bits (306), Expect = 1e-32
 Identities = 76/287 (26%), Positives = 143/287 (49%), Gaps = 5/287 (1%)

Query: 46  RVSATTYARLWRLLARRTDDEFFGMDPRKLKSGSLAFLCRAAMAQPTLATSLETALGFLS 105
           R++     RL+++ A  T DE  G+  R +++ +L  L  A     +L ++L     F +
Sbjct: 52  RITLDQIFRLYQIAAVETGDEMMGLWNRPIRARALQHLLTAVREASSLTSALYRFSTFWN 111

Query: 106 LMLERMPAELVRQQSLAEIVLVEPEAEPNRAFTYFTYWMIVHGVACWLAGRRIPILAIEL 165
           L+L+    EL  +  L  + L     +  + F +     + HG+  WL G  +P+ A++ 
Sbjct: 112 LLLDDYQFELHTRDDLVVLELRPIGDQVPQRFGHMLILKLAHGLMSWLVGHEVPVKAVQF 171

Query: 166 RCAKPDFCADYQVMFSDNLRFDRPRTRMIFSADCLDLPIKRTPEELKRFLAHAPANILVK 225
               P+F  DY  +F  ++ F    + + F       P  R+  E+ +FL  AP + +  
Sbjct: 172 AFGCPEFAEDYATIFPASVDFGASYSSITFERTMFGPPHSRSKPEVIKFLRRAPRDWIFT 231

Query: 226 YRDPDSLATRIKHDLRQLPPHTWPETE--GLAVSLCISASTLRRRLAEEGQTYQGLKDSV 283
                + + +I+  L Q     W + +    A +L ++  TL RRL  +G ++Q +KD +
Sbjct: 232 SCWEHTQSLQIREFLYQ---SNWVDCQLVDAARALRVTPRTLMRRLDADGTSFQAIKDGL 288

Query: 284 RKELAIVWLAEPQISFAEIAERLGFADTSSFYKAFRKWSGSNPGHYR 330
           R+++AI  L   Q S  EI++ +GF+  ++F++AF++W+G+ P  YR
Sbjct: 289 RRDIAIRDLQSGQKSTEEISQDVGFSTAANFHRAFKRWTGATPSSYR 335