Pairwise Alignments

Query, 277 a.a., DNA repair protein from Pseudomonas simiae WCS417

Subject, 294 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  129 bits (324), Expect = 7e-35
 Identities = 85/280 (30%), Positives = 148/280 (52%), Gaps = 18/280 (6%)

Query: 2   PRAIWKGAISFGLVHIPVSLVSATS-SQGVDFDWLDKRSMDPVGYKRINKTTGKEVTKDN 60
           PRA WKG I   LV  PV L  ATS S+ + F+ L K + + +  K ++   G  V + +
Sbjct: 3   PRASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELGL-VERSD 61

Query: 61  IVKGVAFEKGRYVVLSEEEIRSAHPKSTQTIEIIAFVASDQIPLQNIDTPYFLAPD-KRG 119
           +VKG  +E  +Y+++ + ++ S   +S  T+ I AFV +  + +   D PY+LAPD    
Sbjct: 62  LVKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGAMA 121

Query: 120 GKVYALLRETLRKTRKVALANVVLHTKQHLAALMPLDSALVLVMLRWPAEVRSLDELELG 179
            + + +LRE LR++ K+A+A +VL +++ +  + P ++ + +  LR P EVR   +    
Sbjct: 122 EETFVVLREALRRSGKLAIARLVLSSRERVVTIGPRETGMFVCTLRNPNEVRGTADYFGN 181

Query: 180 SDVTKPSLAKGELDMAKRLVDDMSADWQPDDYRDSFQEKIMALVAKKAKAGKIEDVETSK 239
             V KP      L +A+ L++  +  + P  Y D ++  +M ++ +K K  K        
Sbjct: 182 IPVGKPD--PEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLKGHK----PIIA 235

Query: 240 DSEERKSADVIDLTELLKRSLA-------GKPTKKPAAKK 272
            + ER   +V++L + LK SL+        KP  +PAAK+
Sbjct: 236 QAPER--GNVVNLMDALKASLSQAKPPARSKPKAEPAAKE 273