Pairwise Alignments

Query, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

Subject, 285 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  105 bits (262), Expect = 3e-27
 Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 6/174 (3%)

Query: 645 VLDLDPDPALPWKAMLEAAQLTLSVLDELGLQAFVKTSGGKGLHLIVPLA----RRDNWE 700
           + DLDP P +P+  ++ AA+     LDELGL +F KT+GGKGLH++ P A    +  +W 
Sbjct: 108 LFDLDPGPDVPFATVVAAAREMRDRLDELGLVSFCKTTGGKGLHVVTPFAVNKRKPLSWA 167

Query: 701 TVKAFAKGIAQFMTEQLPERFTATSGPKNRVGKIFIDYLRNARGASTVAAYSVRARPGLP 760
             K FA  + + M    P+ +        R G+IF+DYLRN R A+ VA  S RARPG  
Sbjct: 168 EAKGFAHDVCEQMARDNPDLYLIKMSKSLRGGRIFLDYLRNDRMATAVAPLSPRARPGAT 227

Query: 761 VSVPVSREELEGLRGAQQWTVANVLQRLNALKADPWAGYANRQKISKKMWDKLG 814
           VS+P++  +++     +++TV  V   L   K   W  Y + ++  ++   +LG
Sbjct: 228 VSMPLNWTQVKSDLYPKRFTVRTVPALL--AKTTAWQDYCDGERPLEQAIKRLG 279



 Score = 55.1 bits (131), Expect = 5e-12
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 22/106 (20%)

Query: 470 VKPTLVAQVQFAEWTREDVVRQAAFVGLRTDKPVAQVVHEQP-----------------R 512
           +KP LVA+++FA WT + +VRQAAF GLR DKP  +V  E+P                 R
Sbjct: 1   MKPELVAEIEFAGWTADGLVRQAAFKGLREDKPAKEVQAEKPSPPAKTDTPEPGPSAKTR 60

Query: 513 TVHSKKPVKKTSRDVNITHPDRVIDKHSG----TQKQQLAQFYDTI 554
            V  +K  K     V I+ PD+ +   +G      K+ LA++++ +
Sbjct: 61  PVR-RKGAKAEVMGVLISSPDKPLWPDAGDGEPVTKEDLARYHEAV 105