Pairwise Alignments

Query, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

Subject, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  304 bits (778), Expect = 1e-86
 Identities = 186/578 (32%), Positives = 289/578 (50%), Gaps = 18/578 (3%)

Query: 197 ARKTALPEQFTPQLATLVDRAPEG-DWQYEIKFDGYRMLARIQAGEVRLFTRNGHDWTEC 255
           A ++A P    P   TL  R P+G DW +EIK DGYR    I  G++ L+TR G DWT  
Sbjct: 50  ATQSAFPAFIEPCHPTLKKRPPDGADWVHEIKLDGYRAQLHINGGKITLYTRTGLDWTTE 109

Query: 256 LPRQVKALQALKLKDSWLDGEVVSLNGDGLPDFQALQNAFDIGRSLDIVYYLFDAPFLNG 315
                 A + L   D  +DGEV      GLPDFQAL+       S ++ +  FD   L+G
Sbjct: 110 FEAIATAAEDLAGHDVVMDGEVTVFGKTGLPDFQALRRELAKRSSPNLTFQAFDLLHLDG 169

Query: 316 EDRRQAPVEERRAALKEALAGSRSTLLRYSEAFTAHHRDIFESACDLALEGVIGKRLGSP 375
            D R+ P+ ER+  L+E +  +  T+             ++  AC + LEG++ KR  +P
Sbjct: 170 YDLRRVPLIERKRVLRELIGDAAGTIAYVDYLELEEGEPVYRHACKMGLEGIVSKRKDAP 229

Query: 376 YVSRRSADWIKLKCRLSQEFVIVGYTRPQGSRSG-FGALLLAVNNDTGLVYAGRVGTGFD 434
           Y S R   W K KC     F IV +    G++     +L L       LVYAG+  TG+ 
Sbjct: 230 YRSGRQEIWTKTKCTKRDAFPIVAFVEKLGAQPRRIASLYLGRWEGDRLVYAGKAQTGYT 289

Query: 435 QAALKAIYAQLTPLECETSPLAKPLSSAQARGVHWVKPTLVAQVQFAEWTREDVVRQAAF 494
             A + +  +L PL    SPL+ P++  +A    WV+P + A++ +   T + ++R+  F
Sbjct: 290 LTAAREVRERLNPLIIGKSPLSHPINKPKAT---WVEPQVYAEIDYGGVTDDGLLREPVF 346

Query: 495 VGLRTDKPVAQVVHEQPRTVHSKKPVKKTSRDVNITHPDRVIDKHSGTQKQQLAQFYDTI 554
            GL+     A     +P+   +   ++    ++    P+ V+       K++LA ++  +
Sbjct: 347 KGLQDVSRAAG----KPKPTTAPASIRVPPANILQLLPEAVVPS-----KEELANYWTRV 397

Query: 555 SQWILPFLRHRPVSLLRAPEGIEGEQFFQKHSERLAIPNIKQLDQSLDPGHARL-MEIDN 613
           +   L FL  RP+ L+R    I G  F+ K       P + QL      G A + + +D+
Sbjct: 398 ADRALHFLGGRPLKLVRH---IHGTTFYHKGPLPPIPPEVHQLRIEKREGGAGVRLWVDD 454

Query: 614 VGALIGAVQMGSVEFHTWGATSDKIETPDLFVLDLDPDPALPWKAMLEAAQLTLSVLDEL 673
           +  L+G V++G+VE H W A+ D IE  D  + DLDP   + W  ++E A      L+  
Sbjct: 455 LAGLLGLVEIGAVELHPWAASVDDIEHADALIFDLDPGEGVSWAFVVETALRLREFLEAE 514

Query: 674 GLQAFVKTSGGKGLHLIVPLARRDNWETVKAFAKGIAQFMTEQLPERFTATSGPKNRVGK 733
           G + + K +GGKG+HL+ PL  +       A+AK +AQ      P+R+  ++    R GK
Sbjct: 515 GFKTWPKLTGGKGVHLMSPLPAKMTHNAAHAYAKRLAQQFASTDPDRYVTSAQLSRRPGK 574

Query: 734 IFIDYLRNARGASTVAAYSVRARPGLPVSVPVSREELE 771
           +F+DYLRN RG + V  YS RAR G PV+ PV+  ++E
Sbjct: 575 LFLDYLRNGRGTTAVGTYSPRARSGFPVAAPVTWRDIE 612