Pairwise Alignments

Query, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

Subject, 818 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  541 bits (1393), Expect = e-158
 Identities = 321/821 (39%), Positives = 445/821 (54%), Gaps = 48/821 (5%)

Query: 5   LSEYNRKRDFGITAEPAGSAPAGKRKASALSFVIQKHDARNLHYDFRLELDGVLLSWAVP 64
           L  Y +KRDF  T EP G+  AG  +     FV+ KH A   HYD RLE+DGVL SWAVP
Sbjct: 6   LEAYRKKRDFSKTPEPVGNLTAGGNR-----FVVHKHHATADHYDLRLEVDGVLKSWAVP 60

Query: 65  KGPSLDPSHKRLAVHVEDHPLSYGGFEGSIPAGQYGAGDVIVWDRGIWQPHDEPRKAYAA 124
           KGPSL+P+ KRLAV  EDHPL Y  FEG IP G+YG G +IVWD+G+W P  +       
Sbjct: 61  KGPSLNPADKRLAVETEDHPLDYIDFEGVIPEGEYGGGPMIVWDKGVWAPMGDVDDDLRK 120

Query: 125 GKLKFTLVGEKLSGDWALVR-TRLKGSGDKEQWLLIKEKDPQARSADDYDIVQAQPNSVL 183
           G  KF L GEKL+G W L R  R  G  D+  WLL KE+DP A ++   DI+ A+P SV 
Sbjct: 121 GAFKFRLAGEKLNGGWMLARLKRRPGEEDQRNWLLFKERDPAADTS--IDILAARPESVK 178

Query: 184 S----DASVGKPKTRAK-----------ARKTALPEQFTPQLATLVDRAPEGD------- 221
           S    +  V KPK   K           A K A PE+  PQLAT     PE +       
Sbjct: 179 SGRRIEELVEKPKAPPKPVKLNPGALAGAVKAAQPERIEPQLATQTILPPEAEKDSKKPE 238

Query: 222 -WQYEIKFDGYRMLARIQAGEVRLFTRNGHDWTECLPRQVKALQALKLKDSWLDGEVVSL 280
            W +EIKFDGYR +A +  G+VRL TR G DWT+      +  + L  +D  +DGE+V L
Sbjct: 239 RWLHEIKFDGYRTMAHVADGKVRLVTRGGLDWTKRYGDLPEVFRRLPCRDVIIDGEIVVL 298

Query: 281 NGDGLPDFQALQNAFDIGRSLDIVYYLFDAPFLNGEDRRQAPVEERRAALKEALAG--SR 338
           +  G+  F  LQ+A   G    +V+Y FD   LNG +    P+E+R+A LK+ LAG  S 
Sbjct: 299 DETGVSRFALLQDALSTGAGNSLVFYAFDLLHLNGWNLFDVPLEKRKALLKQLLAGQVSS 358

Query: 339 STLLRYSEAFTAHHRDIFESACDLALEGVIGKRLGSPYVSRRSADWIKLKCRLSQEFVIV 398
            + +++S+      R +++ A ++ LEG++ KR+ +PY S RS  W K K   +++FVIV
Sbjct: 359 RSAIQFSDHVLGEGRALYDRASEMGLEGIVSKRISAPYRSGRSKTWTKTKALKAEDFVIV 418

Query: 399 GYTRPQGSRSGFGALLLAVNNDTGLVYAGRVGTGFDQAALKAIYAQLTPLECETSPLAKP 458
           GYT  + +  G  +L L    D  L Y G+VGTGFD   LK + A+L PL    + L   
Sbjct: 419 GYTVSEAA-EGIASLALGEWADGELEYRGKVGTGFDAQMLKELLARLEPLRAGAAKL--- 474

Query: 459 LSSAQARGVHWVKPTLVAQVQFAEWTREDVVRQAAFVGLRTDKPVAQVVHEQPRTVHSKK 518
                 R + WV+P L A + +   T ++V+R A F GLR       V    P ++  K+
Sbjct: 475 --EGAPREIIWVRPLLRAHIHYGNRTTDNVLRHAVFKGLR------DVELSTPVSMSRKR 526

Query: 519 PVKKTS-RDVNITHPDRVIDKHSGTQKQQLAQFYDTISQWILPFLRHRPVSLLRAPEGIE 577
            +       ++IT+P R +   SG  K  LA +Y  I  ++LP +  RPVSL+R P G  
Sbjct: 527 LISDADLAGISITNPTRRLFGKSGPTKLDLAVYYAMIGDFMLPHILGRPVSLVRCPTGRT 586

Query: 578 GEQFFQKHSERLAIPNIKQLDQSLDPGHAR-LMEIDNVGALIGAVQMGSVEFHTWGATSD 636
            + FFQ+H      P++     +   G A+  + +++    +   Q G VEFH WG T  
Sbjct: 587 QDCFFQRHPFTGMPPSVATFQATNSEGEAKTYLSVEDARGYLALAQFGVVEFHNWGTTRK 646

Query: 637 KIETPDLFVLDLDPDPALPWKAMLEAAQLTLSVLDELGLQAFVKTSGGKGLHLIVPLARR 696
            +  PD  V DLDP   + W+ ++EAA    + L+ L L  FVKTSGG+G+H++VP+  +
Sbjct: 647 LLGKPDRVVFDLDPGEGIAWREVVEAAIHIKAELEALALVPFVKTSGGRGVHVVVPVVPK 706

Query: 697 DNWETVKAFAKGIAQFMTEQLPERFTATSGPKNRVGKIFIDYLRNARGASTVAAYSVRAR 756
            +W+        +A  +    P  FT T G  NR+ +IFID+ RNAR  +  A YS+RAR
Sbjct: 707 LDWKKFHQATSALATRLAATAPATFTTTMGKDNRIRRIFIDFHRNARSHTWAAPYSLRAR 766

Query: 757 PGLPVSVPVSREELEGLRGAQQWTVANVLQRLNALKADPWA 797
             LP S P+S  +LE +        ++ L  L A   DPWA
Sbjct: 767 TNLPASTPLSWADLETIDAPADLNYSS-LPGLLATSGDPWA 806