Pairwise Alignments

Query, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  253 bits (645), Expect = 2e-71
 Identities = 145/349 (41%), Positives = 207/349 (59%)

Query: 196 IGLAIALVMALLVSLIARSIVRPLQAAVNAMGNIASGESDLTRSLDTHGQDEVTQLSRHF 255
           IGL I LVMALL S      +  L    NA+ +IA G+ DLTR LD   QDEV  L+  F
Sbjct: 291 IGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKF 350

Query: 256 NSFTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRSQQQSQQMELVATAINEVTYGV 315
           N F  +L Q+V  ++  + AL Q +    ++ATQA  R + Q  ++ +VATA+ E+    
Sbjct: 351 NKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASAT 410

Query: 316 QDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLSGTISQAVEVIRTLSAESTQIG 375
            ++A NAE+ A     +    + G   +  S Q IDQL+  ++ AV +I  L   + +I 
Sbjct: 411 AEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEIS 470

Query: 376 SVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQGMIE 435
           ++L  IR IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+L+QRT  ST EIQ  I 
Sbjct: 471 TILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIA 530

Query: 436 RLQGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGESLRNLNGLNASIASATLQQAH 495
            LQ  +  AV V+++SH   + ++    Q GASL AI E+++ ++ +   IASA  +Q+ 
Sbjct: 531 GLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSL 590

Query: 496 VVEDINQNVTEAAGLSHSTALAAEQSSVASAHLRGLSEQLDGLLRQFKV 544
           V  DIN N      +S   A  A+QS   +  L  ++++L+  + +FK+
Sbjct: 591 VTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639