Pairwise Alignments

Query, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (616), Expect = 5e-68
 Identities = 137/378 (36%), Positives = 213/378 (56%)

Query: 167 EPWGWIIGSGVYVDDVQAEFSSQVWKASFIGLAIALVMALLVSLIARSIVRPLQAAVNAM 226
           E   W +   V V +V AE  +   +     LA+A +   +   +A SI  P+       
Sbjct: 267 ESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRF 326

Query: 227 GNIASGESDLTRSLDTHGQDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSN 286
            ++  G+ DL++ ++  G DE+ QLS+ FN F  K+ Q +  +   +  L  +++ +   
Sbjct: 327 TDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRK 386

Query: 287 ATQAHDRSQQQSQQMELVATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSS 346
           A   HD SQQQ  Q   V TAIN++   + ++A NA  AA     A   A QG+  ++ +
Sbjct: 387 ALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKA 446

Query: 347 LQQIDQLSGTISQAVEVIRTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQG 406
            + I +L+  I    +V+  L++ + +IGS+L+ IR I++QTNLLALNAAIEAARAG+QG
Sbjct: 447 KEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQG 506

Query: 407 RGFAVVADEVRLLAQRTQKSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAG 466
           RGFAVVADEVR LA RT  ST EIQ MI +LQ  ++ AV  +    + +   +  + +A 
Sbjct: 507 RGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAV 566

Query: 467 ASLTAIGESLRNLNGLNASIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQSSVASA 526
             L +I + + +++  N  +A+AT +Q+ VV  INQN+ E   ++  T   AE+ + AS 
Sbjct: 567 QVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASK 626

Query: 527 HLRGLSEQLDGLLRQFKV 544
            LR LS +LD L+  FK+
Sbjct: 627 SLRELSGRLDKLVGNFKL 644