Pairwise Alignments

Query, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (614), Expect = 8e-68
 Identities = 151/437 (34%), Positives = 232/437 (53%), Gaps = 4/437 (0%)

Query: 112 LDGQNLSAIRDPDGFAVFNEFVILAKAKGAGIVNYRWPKPGAEA----PVAKTSYIQLFE 167
           +DGQN S +  PD   +      L+ A     +     +    A     V K  +     
Sbjct: 195 IDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLALKLNGVEKFFFFTAVP 254

Query: 168 PWGWIIGSGVYVDDVQAEFSSQVWKASFIGLAIALVMALLVSLIARSIVRPLQAAVNAMG 227
              W     +  D   A  S  +       L I +++ ++VS +   + R L     A+ 
Sbjct: 255 DTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWLVSFLFRDLGRVSKALE 314

Query: 228 NIASGESDLTRSLDTHGQDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNA 287
            IASG++DLT+ L+    DEV QL+ +FN+F + +  +V +L   + AL Q S+   + A
Sbjct: 315 EIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQA 374

Query: 288 TQAHDRSQQQSQQMELVATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSL 347
            +   R + Q  ++ +VATAINE+    Q++A NA+H A    +A      G   +  + 
Sbjct: 375 EERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQ 434

Query: 348 QQIDQLSGTISQAVEVIRTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGR 407
           + I  L+  +  A EVI+ L A   QI ++L  I++IA+QTNLLALNAAIEAARAGEQGR
Sbjct: 435 RSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGR 494

Query: 408 GFAVVADEVRLLAQRTQKSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGA 467
           GFAVVADEVR+L+QRT  ST EIQ MIE LQ  +  AV ++ DS   +  +++ A +A  
Sbjct: 495 GFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASV 554

Query: 468 SLTAIGESLRNLNGLNASIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQSSVASAH 527
           SL  I +++  ++ +   IASA  +QA V  +I +N      +S+  A  A  ++  +A 
Sbjct: 555 SLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAE 614

Query: 528 LRGLSEQLDGLLRQFKV 544
           L  LS +L+  +R+FK+
Sbjct: 615 LSELSHELEQEIRRFKL 631