Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  301 bits (772), Expect = 2e-86
 Identities = 181/463 (39%), Positives = 262/463 (56%), Gaps = 30/463 (6%)

Query: 9   VVLIDDDPHLRQALCQTLDLAGLNVLTLGEATGLTARLSRDWPGVVVSDIRMPGMDGLEL 68
           V ++DDD  +R  + +TL  A +   T  +A  +   L R+ P V+VSDIRMPGMDG+ L
Sbjct: 6   VWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIAL 65

Query: 69  LAELHGQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRRALALRRLV 128
           L ++H + PELPV+++T H D+  AV A + GA+++L KPF  D  L  V RA+A  +  
Sbjct: 66  LNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQ-- 123

Query: 129 LDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATRADVLILGETGAGKEVVARA 188
            + R      S+    +  ++G +P M  +   IG L+ +   VLI GE+G GKE+VA A
Sbjct: 124 -EQRKTSHRPSENYS-APEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHA 181

Query: 189 LHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLFLDE 248
           LH  S R   PF+A+N  A+ + ++ESELFGHE GAFTGA   R G+FE ANGGTLFLDE
Sbjct: 182 LHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLDE 241

Query: 249 IESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRFRADLYYR 308
           I  M LD+Q +LLR+L +    R+GG+  I +D+RI+AAT ++L +   QG+FR DL++R
Sbjct: 242 IGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHR 301

Query: 309 LNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQPGQRALLLRHSWPGNVREL 368
           LNV  + IP LRER +D   L +HF   A+   G+ +  L P    +L +  WPGNVR+L
Sbjct: 302 LNVIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQL 361

Query: 369 QNAAE---RFALGLELALDNTP------------DN-----------PSAGTLTSTPGGL 402
           +N        A G E+   + P            DN             +   +     L
Sbjct: 362 ENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDISWQKQLETWAKSALASGETELL 421

Query: 403 SEQVEQFEKSLIAAELTRPHSSMRSLAEALGVPRKTLHDKLRK 445
           +  + +FE+ L+ A L   +   +  A+ LG  R TL  KL++
Sbjct: 422 AYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKE 464