Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 463 a.a., Helix-turn-helix, Fis-type from Pseudomonas syringae pv. syringae B728a

 Score =  756 bits (1951), Expect = 0.0
 Identities = 394/458 (86%), Positives = 419/458 (91%), Gaps = 4/458 (0%)

Query: 2   SIDNQIQVVLIDDDPHLRQALCQTLDLAGLNVLTLGEATGLTARLSRDWPGVVVSDIRMP 61
           +ID+QIQVVLIDDD HLRQAL QTLDLAGLNVL+L EATGL  R+ RDWPGVVVSDIRM 
Sbjct: 6   AIDSQIQVVLIDDDSHLRQALRQTLDLAGLNVLSLPEATGLAERIGRDWPGVVVSDIRMQ 65

Query: 62  GMDGLELLAELHGQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRRA 121
           GMDGLELL +LH QDP+LPVLLITGHGDVPLAV+AMRAGAYDFLEKPFASDA+LDSVRRA
Sbjct: 66  GMDGLELLDQLHAQDPDLPVLLITGHGDVPLAVKAMRAGAYDFLEKPFASDAMLDSVRRA 125

Query: 122 LALRRLVLDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATRADVLILGETGAG 181
           LALRRLVLDNRSLRLALSDRQQLSTRL+G SP +LRLREQIGALA TRADVLILGETGAG
Sbjct: 126 LALRRLVLDNRSLRLALSDRQQLSTRLIGQSPPILRLREQIGALAGTRADVLILGETGAG 185

Query: 182 KEVVARALHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANG 241
           KEVVARALHDLS+RRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANG
Sbjct: 186 KEVVARALHDLSNRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANG 245

Query: 242 GTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRF 301
           GTLFLDEIESMSLDVQVKLLRLLQERVVER+G NQ IPLDIRIIAATKEDLR +ADQGRF
Sbjct: 246 GTLFLDEIESMSLDVQVKLLRLLQERVVERMGSNQQIPLDIRIIAATKEDLRHAADQGRF 305

Query: 302 RADLYYRLNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQPGQRALLLRHSW 361
           RADLYYRLNVA LRIPPLRERGEDALMLF+H+AD AS RHG+P HEL+PGQRALLLRH+W
Sbjct: 306 RADLYYRLNVASLRIPPLRERGEDALMLFEHYADAASMRHGIPKHELKPGQRALLLRHNW 365

Query: 362 PGNVRELQNAAERFALGLELALDNTPDNPSAGTLTSTPGGLSEQVEQFEKSLIAAELTRP 421
           PGNVRELQNAAERFALGLEL L+  P+   A       GGLS+QVE FE++LIAAEL RP
Sbjct: 366 PGNVRELQNAAERFALGLELELE--PEGVDAEQAPPPGGGLSDQVESFERALIAAELARP 423

Query: 422 HSSMRSLAEALGVPRKTLHDKLRKHGLNFANQS--SDD 457
           HSS+RSLAEALGVPRKTLHDKLRKHGL F + S  SDD
Sbjct: 424 HSSVRSLAEALGVPRKTLHDKLRKHGLTFGDSSGASDD 461