Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 444 a.a., Helix-turn-helix, Fis-type from Pseudomonas syringae pv. syringae B728a

 Score =  435 bits (1118), Expect = e-126
 Identities = 234/440 (53%), Positives = 300/440 (68%), Gaps = 7/440 (1%)

Query: 9   VVLIDDDPHLRQALCQTLDLAGLNVLTLGEATGLTARLSRDWPGVVVSDIRMPGMDGLEL 68
           V+++DD+  +RQA+ Q L L+G  V     A    A L   +PGVV++D+RMPGM GLEL
Sbjct: 5   VIVVDDEAPIRQAVEQWLTLSGFEVQVFARAEECLAHLPEHFPGVVLTDVRMPGMSGLEL 64

Query: 69  LAELHGQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRRALALRRLV 128
           L  L G D +LPV+L+TGHGDVP+AV+AMR GAYDFLEKPF+ + L+ ++RRAL  R+LV
Sbjct: 65  LTRLQGADRDLPVILLTGHGDVPMAVEAMREGAYDFLEKPFSPETLISNLRRALEKRQLV 124

Query: 129 LDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATRADVLILGETGAGKEVVARA 188
           L+NR L      R +L   L+G SP M  LR Q+  LA    +V+I GETG+GKE+VAR 
Sbjct: 125 LENRRLHEQADARTRLDATLLGVSPGMQTLRRQVLELAQLPVNVIIRGETGSGKELVARC 184

Query: 189 LHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLFLDE 248
           LHD   R + PFVA+N  A+ E + E+ELFGHE GAFTGAQ +RIG+ E+A+GGT+FLDE
Sbjct: 185 LHDFGPRAARPFVALNCAAIPEHLFEAELFGHESGAFTGAQGKRIGRLEYADGGTVFLDE 244

Query: 249 IESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRFRADLYYR 308
           IESM +  QVKLLR+LQ++ +ERLG NQ I +D+RIIAATK DL + A  GRFR DL YR
Sbjct: 245 IESMPMAQQVKLLRVLQDKRLERLGSNQSIDVDLRIIAATKPDLLEEARAGRFREDLAYR 304

Query: 309 LNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQPGQRALLLRHSWPGNVREL 368
           LNVA LR+PPLRER ED   LF HFA  A+ R G     L   + +LLL H WPGNVREL
Sbjct: 305 LNVAELRLPPLRERLEDIAQLFSHFARAAAERVGREAPALDAARLSLLLGHDWPGNVREL 364

Query: 369 QNAAERFALGLELALDNTPDNPSAGTLTSTPGGLSEQVEQFEKSLIAAELTRPHSSMRSL 428
            NAAER ALGLE AL   PD    G        L+ + E FE   + A L R    ++++
Sbjct: 365 ANAAERQALGLEQALPQ-PDTQWQG------HSLAARQEAFEAQCLRASLARHKGDIKAV 417

Query: 429 AEALGVPRKTLHDKLRKHGL 448
              L +PR+TL++K+++H L
Sbjct: 418 LNELQLPRRTLNEKMQRHAL 437