Pairwise Alignments

Query, 273 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 314 a.a., Alkanesulfonates transport system permease protein from Pseudomonas fluorescens FW300-N2E2

 Score =  204 bits (518), Expect = 3e-57
 Identities = 110/269 (40%), Positives = 160/269 (59%), Gaps = 1/269 (0%)

Query: 1   MTSKTQALPLVEPVAINRSAWPRRLKGLVLPVLILLVLEVVVRVGWLPSYQMPAPSEIAV 60
           +++  Q +  + P  + R   P  L  L+ P+++LL+ E+  R G +P   + APS+I  
Sbjct: 43  LSATGQGVSRLAPDWLRRWRTPEALLRLISPIVLLLLWELASRWGLIPQRVIAAPSQIGG 102

Query: 61  TL-TDLAEGSLWKHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSI 119
           TL   +  G L +H+  SL R L+G +IG ++ +  A   GL++  E  L+     LR+I
Sbjct: 103 TLWAMIVSGELGRHLLVSLQRALVGLSIGVTIGVFAALISGLTKRGEVVLDSPMQMLRTI 162

Query: 120 PSLAWVPLLLLWLGIDETSKIVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFSRWR 179
           PSLA VPL +LW GI E +KI LI IG  FPVYLN  A IR+ID KL+E     G SR  
Sbjct: 163 PSLALVPLFILWFGIGEFTKIALIVIGTTFPVYLNLFAGIRNIDPKLIEAANTLGLSRRE 222

Query: 180 LVRRILLPAALPGLFTGLRSGLSLAWMFLVAAELIAATKGLGYLLSDGRETSRPDIVLAA 239
           L+  ++LP +L   F GLR  L ++W+ LV  E I  T G+GYL SD R+  R D+++  
Sbjct: 223 LIWHVILPGSLTSFFVGLRYSLGISWLALVFVEQINTTAGIGYLASDARDFMRTDVIVIC 282

Query: 240 IIVLASLGKVSDGLLATLEKRCLAWRDTF 268
           +++ + LG + DGL+ TLE+  LAWR TF
Sbjct: 283 LLIYSVLGLLIDGLIRTLERFALAWRPTF 311