Pairwise Alignments

Query, 415 a.a., chloride channel protein from Pseudomonas simiae WCS417

Subject, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (267), Expect = 7e-28
 Identities = 112/425 (26%), Positives = 190/425 (44%), Gaps = 41/425 (9%)

Query: 7   STLILALVVVLTGIGAGLGGMLLALLLHGIQHLAYGYSLDSLVSDETFLLGVTAAAPERR 66
           S L L+L+V   GI AGL G      +H +         D L S+    L +  AA    
Sbjct: 32  SVLFLSLLV---GILAGLVGTYFEQAVHLVSETR----TDWLKSEIGSFLPLWLAA---- 80

Query: 67  LLVLVVCGLVAGLGWWAIYRY-----GRPLVSIKQAVAEKMPIMPPKTTLAHAVLQIITV 121
               ++   +A +G++ ++R+     G  +  I+ A+    P+   +         +  +
Sbjct: 81  ---FLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGAL 137

Query: 122 ALGSPLGREVAPREVGALAATWLSQ--RARLDPQMHRLLVACGAGAGLAAVYNVPLGGAV 179
             G  LGRE    ++G      +S   R + +   H LL A GA  GLAA +N PL G +
Sbjct: 138 GSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAA-GAAGGLAAAFNAPLAGIM 196

Query: 180 FVLEVLVGAFSWP-AAVIALATSAIAASVAWIGLGAQ------LQYEVPNFVLSPDLIAW 232
           FV+E +   F +   +V A+  SA+AA++ +  +  Q       QY+ P        +  
Sbjct: 197 FVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPEL----STLGL 252

Query: 233 AVVCGPVFGVAAYAFTQLTGKARAQAARGWRLP-VLALINFTIIGG----LAMVLPQILG 287
            ++ G +FGV    F  L   A+    +  R      L+  ++IGG    L + +P++ G
Sbjct: 253 FLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTG 312

Query: 288 NGKGPAQLGFDNELSIGLAALLLVVKVLITISSLRAGAEGGLLTPGLANGALLAIILGGA 347
            G        +     G+  LL V ++  T+    +GA GG+  P LA G L     G  
Sbjct: 313 GGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLI 372

Query: 348 WSLAWP--GVPLGAFAIIGAAAFLAASMSMPLTAIVLVAEFTRIDHDFLVPIILAVVGSM 405
             + +P   +  G FAI G  A  AA++  P+T I+LV E T  ++  ++P+I+  +G++
Sbjct: 373 AKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTN-NYHLILPLIITSLGAV 431

Query: 406 CMSKL 410
             ++L
Sbjct: 432 IFAQL 436