Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (267), Expect = 3e-28
 Identities = 84/286 (29%), Positives = 129/286 (45%), Gaps = 5/286 (1%)

Query: 3   DLNLLITLDVLLAEGSVAAAAKRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVATPRA 62
           DLNLL  L+ LL    ++ AA+ L +S  A+SRAL RLRE  GDPLLV+       T + 
Sbjct: 12  DLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNEYRLTAKG 71

Query: 63  LELRDQVSRLVQEANAVLRPVQSLNMNQVTRTFTLRTSEEFVENFGPALLARAARDAPGV 122
             L  ++ R +     +L      +    +  FT+   +  +    P LLAR  + AP +
Sbjct: 72  ERLCSELERTLNTIRHMLVD-DKFDPMHYSGVFTIGALDFEMMMIVPKLLARFQQRAPNL 130

Query: 123 RLRFI-HKADKDSTLLREGSVDLETGVVDPTAGPEVLTQALFRDRLVGVVRSGHPLSRGD 181
           +L+ + + A        E   DL     D +    V  Q LF D    V+   HPL+   
Sbjct: 131 KLQIVPYNAYMPLHDYLEKVADLLLYSTDESP-TNVFKQRLFNDNYAVVMCRNHPLANQP 189

Query: 182 VSVERYAAGQHVYVSRRGQDRGQIDDLLEAQGLTRQITTIVAGFATAIALARDTDLIASV 241
           +++E Y   +HV +S  G  +  +D  L+     R++   +  F+    L  +TDLIA++
Sbjct: 190 ITLESYCQSRHVIISGNGLGKTDMDHELKKLNYQREVVASLPHFSMVPELLINTDLIATL 249

Query: 242 PERYTAH--QPEGLHRFALPLTLPTFTVAMLWHPRLDADLAHRWLR 285
           P R   H  Q   +    LP     F V   WH    +   H+W+R
Sbjct: 250 PRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVR 295