Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (320), Expect = 3e-34
 Identities = 94/294 (31%), Positives = 135/294 (45%), Gaps = 12/294 (4%)

Query: 3   DLNLLITLDVLLAEGSVAAAAKRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVATPRA 62
           DLNLL+ L VL+ E SV  AA RL LS SA+S++LA+LRE   DPL VR   GL ATP+A
Sbjct: 24  DLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNATPKA 83

Query: 63  LELRDQVSRLVQEANAVLRPVQSLNMNQVTRTFTLRTSEEFVENFGPALLARAARDAPGV 122
           L L+ ++  LV +   + +P      +   R F +   E       P  L    R  P +
Sbjct: 84  LFLKPKLDVLVNQLELLTQPAHFSPQSSEYR-FQIAAVESVYPLIMPYFLPTIFRHGPHL 142

Query: 123 RLRFIHKADKDSTLLREG---------SVDLETGVVDPTAGPEVLTQALFRDRLVGVVRS 173
            +      ++    L+ G          +D+    +      ++  Q ++RD    VVR 
Sbjct: 143 SISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCVVRR 202

Query: 174 GHPLSRGDVSVERYAAGQHVYVSRRGQDRGQIDDLLEAQGLTRQITTIVAGFATAIALAR 233
           GHP+ + D ++  Y   +HV V   G DR  +D  L   G  R I   V  F +A +L  
Sbjct: 203 GHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAASLCT 262

Query: 234 DTDLIASVPERYT--AHQPEGLHRFALPLTLPTFTVAMLWHPRLDADLAHRWLR 285
            TD I + P  +T    +   L    LP+  P     + WH   + D A RWLR
Sbjct: 263 YTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDPALRWLR 316