Pairwise Alignments

Query, 404 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 1065 a.a., Probable conserved two-domain membrane protein from Mycobacterium tuberculosis H37Rv

 Score =  145 bits (365), Expect = 7e-39
 Identities = 99/314 (31%), Positives = 154/314 (49%), Gaps = 20/314 (6%)

Query: 2   QSTSRGSLVSLSLSMLLASLGTSIANVALPSLTRAFDASFHAVQWVVLAYLLAITAVIVS 61
           Q +S   L+  +    LA L ++I NVA P + R F +    + W++ AY +   A +V+
Sbjct: 36  QPSSSAVLLVAAFGAFLAFLDSTIVNVAFPDIQRHFHSDISDLSWMLNAYNIVFAAFLVA 95

Query: 62  AGRLGDRFGRRRSLLAGLLLFAVACGLCGMASSLAWLIAARVLQGLGAAVMMAMALGMVG 121
           AGRL D  GR+R  + G+ LF VA GLC +A S+  L+A RVLQG+GAAV++  +LG+V 
Sbjct: 96  AGRLADLMGRKRVFILGVALFTVASGLCAIAESVGELVAFRVLQGIGAAVLVPASLGLVV 155

Query: 122 DTVTKARTGRVMGLLGTMSAVGTAMGPSVGGVLLSVWGWRAIFLVGVPLGLVAVALACCY 181
           +     R    + L G   A+   +GP +GG L+   GWR +FLV +PLG+ AV  A   
Sbjct: 156 EAFPAERRAHGVNLWGAAGAIAAGLGPPIGGALIEADGWRWVFLVNLPLGVFAVLAARRA 215

Query: 182 LPVDRPHARSSAGSGFWPSLKDASLRTGLVMSALVAAVIMATFVVGPFYLSRGLGLDPEW 241
           L  +R     +AG    P ++      G V+ A    ++    + GP +    L      
Sbjct: 216 LVENR-----AAGRRRVPDVR------GAVLLAFALGLLTLGLIKGPDWGWASLPTSGSL 264

Query: 242 MGLVMAVGPCVAAITGVPAGRLTDRLGSPRMTLAGLGMMACGALLLSCAWGLFVYLGALV 301
           +   +A+   V +    PA  +   L   +  +AG G+ A  +       G + YL   V
Sbjct: 265 LAAAVAMVGFVMSSRHHPAPMVEPTLLRIQSFVAGTGLTAVASA------GFYAYLLTHV 318

Query: 302 ILTT---GYSLFQA 312
           +      GY+L +A
Sbjct: 319 LFLNYVWGYTLLEA 332



 Score = 33.5 bits (75), Expect = 3e-05
 Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 39/152 (25%)

Query: 54  AITAVIVSA--GRLGDRFGRRRSLLAGLLLFAVACGLCGMASSLAWLIAA---------- 101
           A+ A +V+A  GR+ DR G R         F V  G    A+SL W +            
Sbjct: 340 ALVAAVVAAVLGRVADRHGYR---------FIVGIGALIWAASLLWYLKVVGSQPDFLGE 390

Query: 102 ----RVLQG---------LGAAVMMAMALG-----MVGDTVTKARTGRVMGLLGTMSAVG 143
               ++LQG         LG+A +  +A G         T T  + G V+G+   +  VG
Sbjct: 391 WLPGQILQGIGVGATFPLLGSAALARLAKGGSYATASAVTGTIRQVGAVIGVAVLVILVG 450

Query: 144 TAMGPSVGGVLLSVWGWRAIFLVGVPLGLVAV 175
           T    +    L   W   AI  V V +G +++
Sbjct: 451 TPAPGAAEEALRHGWALAAICFVAVGIGALSL 482