Pairwise Alignments

Query, 404 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 508 a.a., Probable conserved integral membrane transport protein from Mycobacterium tuberculosis H37Rv

 Score =  138 bits (347), Expect = 4e-37
 Identities = 126/465 (27%), Positives = 200/465 (43%), Gaps = 76/465 (16%)

Query: 1   MQSTSRGSLVSLSLSMLLASLGTSIANVALPSLTRAFDASFHAVQWVVLAYLLAITAVIV 60
           M    R ++++  L + +  +  +I NVALPS+ + F      +QW V  Y L + AV++
Sbjct: 1   MTPRQRLTVLATGLGIFMVFVDVNIVNVALPSIQKVFHTGEQGLQWAVAGYSLGMAAVLM 60

Query: 61  SAGRLGDRFGRRRSLLAGLLLFAVACGLCGMASSLAWLIAARVLQGLGAAVMMAMALGMV 120
           S   LGDR+GRRRS + G+ LF V+  +C +  SLA    ARV+QGLGAA +  ++L ++
Sbjct: 61  SCALLGDRYGRRRSFVFGVTLFVVSSIVCVLPVSLAVFTVARVIQGLGAAFISVLSLALL 120

Query: 121 GDTVTKAR-TGRVMGLLGTMSAVGTAMGPSVGGVLLSVWGWRAIFLVGVPLGLV------ 173
             +    R   R +     +  VG A  P++GG+++   GWR++FLV VPLG +      
Sbjct: 121 SHSFPNPRMKARAISNWMAIGMVGAASAPALGGLMVDGLGWRSVFLVNVPLGAIVWLLTL 180

Query: 174 ------------------------AVALACCYLPVDRPH-ARSSAG--------SG--FW 198
                                   AVAL   Y  ++ P   R SAG        +G   W
Sbjct: 181 VGVDESQDPEPTQLDWVGQLTLIPAVAL-IAYTIIEAPRFDRQSAGFVAALLLAAGVLLW 239

Query: 199 PSLK----------------DASLRTGLVMSALVAAVIMATFVVGPFYLSRGLGLDPEWM 242
             ++                +   R+ L++  +V +    T +V   +      L P   
Sbjct: 240 LFVRHEHRAAFPLVDLKLFAEPLYRSVLIVYFVVMSCFFGTLMVITQHFQNVRDLSPLHA 299

Query: 243 GLVMAVGPCVAAITGVPAGRLTDRLGSPRMTLAGLGMMACGALLLSCAWGLFVYLGALVI 302
           GL+M   P    +  + AGR  ++ G     L  L  M  G  + + +        A  +
Sbjct: 300 GLMMLPVPAGFGVASLLAGRAVNKWGPQLPVLTCLAAMFIGLAIFAISMD-----HAHPV 354

Query: 303 LTTGYSLFQAANNTAV-------MGDVEGARRGTVSGLLNLSRNLGLIVGAWALGA-VFA 354
              G ++F A             M  V+  R G  +G+LNL R+LG I G   LG  V A
Sbjct: 355 ALVGLTIFGAGAGGCATPLLHLGMTKVDDGRAGMAAGMLNLQRSLGGIFGVAFLGTIVAA 414

Query: 355 WASPDVTRALPQSVAYGLHTTFSVALGLILLASVMAWRRFAAFNG 399
           W    +  ALP ++A  +    + A+ + ++         AAF G
Sbjct: 415 W----LGAALPNTMADEIPDPIARAIVVDVIVDSANPHAHAAFIG 455