Pairwise Alignments

Query, 1115 a.a., alpha-amylase from Pseudomonas simiae WCS417

Subject, 686 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella sp. ANA-3

 Score = 67.8 bits (164), Expect = 3e-15
 Identities = 116/541 (21%), Positives = 194/541 (35%), Gaps = 115/541 (21%)

Query: 34  NNDGI--GDFPGLIAKLDYIADLGVNTIWLLPFYPSPRRD---DGYDIAEYRGVHSDYGT 88
           N+DG   GD  G+   LDY+A LGV  +W+ P   + +      GY +     V   +G+
Sbjct: 191 NSDGRHGGDIEGIRQHLDYLAKLGVTQLWINPLLENNQAQYSYHGYAMTNLYRVDPRFGS 250

Query: 89  MADAKRFIAEAHKRGLRVITELVINHTSDQHPWFQRARKA------KPGSAARDFYVWSD 142
             D +R + EA + GL VI ++V+NH    H W +    +      +  +A       + 
Sbjct: 251 NQDYQRLVTEAKQHGLGVIKDVVLNHIGSNHWWLKDLPSSDWLNVPQQPNATDTQTAPAA 310

Query: 143 DDQKYDGTRIIFLDTEKSNWTWDPVAG-----QYFWHRFYSHQPDLNFDNPQVMKAVLSV 197
                  T + F    ++    DP A       +    F    PDLN  NP++   ++  
Sbjct: 311 SSTSLSSTNLGFTSHRRTT-VQDPYADMQDKRDFVDGWFVDSMPDLNQRNPKLATYLIQN 369

Query: 198 MRYWLD-MGIDGLRLDAIPYLIERDGTNNENLPETHDVLKQIRAEIDAHYPDRMLLAEAN 256
             +W++  G+ G+R D   Y  +               L Q    + A YP   ++ E  
Sbjct: 370 SIWWVEYAGLSGIREDTYSYADKA-------------FLTQWTKALMAEYPHFNIVGE-- 414

Query: 257 QW---PEDTQLYFGDKKGDDG--DECHMAFHFPLMPRMYMALAQEDRFP----------I 301
           +W   P     +   K   DG   +      FPL  ++  +L + + +            
Sbjct: 415 EWTANPITVSYWQKGKINADGYSSDLPSLMDFPLYEKLLESLNEPEGWDTGFIKLYEMLA 474

Query: 302 TDILRQTPEIPANCQWAIFLRNHDELTLEMVTDKERDYLWNYYAADRRARINLGIRRRLA 361
            D++  TP      Q  +F  NHD                                 R+ 
Sbjct: 475 NDVVYATPS-----QLVLFEGNHD-------------------------------TNRIY 498

Query: 362 PLMERDRRRVELLNSLLLSMPGTPTLYYGDEIGMGDNIYLGDRDGVRTPMQWSIDRNGGF 421
            L++ +    ++  + +L+    P L+YG E+ M      G  DGV        D  GGF
Sbjct: 499 SLLKENLPLYQMALTYVLTAKRIPQLFYGTEVLMTSPTE-GRHDGVVRS-----DFPGGF 552

Query: 422 SRADPASLVLPPIMDPQYGYPSVNVETQAQDPHSLLNWTRRMLAVRKQSKAFGRGSLKML 481
           +             +   G+    +  + Q     L + R +L  RK S A   G L   
Sbjct: 553 AN------------NKVNGFSGKGLNAKQQ---QALAFVRTLLNYRKHSTALQTGDLLHF 597

Query: 482 SPSNR-----RILAYTREFTGEDGRNEIILCVANVSRSAQAAELDLSAFAGMVPVEMLGG 536
            P N      R +A          + +    +   +++ QA  LDLS F+     ++L G
Sbjct: 598 VPQNGIYVQFRCVAKQAAAGNACYQADTDKVMVIYNKNDQAQTLDLSRFS-----KVLAG 652

Query: 537 N 537
           N
Sbjct: 653 N 653