Pairwise Alignments

Query, 698 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 761 a.a., diguanylate phosphodiesterase from Pseudomonas fluorescens FW300-N2E3

 Score =  464 bits (1195), Expect = e-135
 Identities = 268/687 (39%), Positives = 389/687 (56%), Gaps = 19/687 (2%)

Query: 5   SYSPSLVVISLFVAILASYTALDLSGRIATA-NGRTVYLWITGGAIAMGVGVWSMHFIGM 63
           +++P LV+++  VA  AS+  LD++ R+  A N  +  LW   GA  +  G+W+MHFI M
Sbjct: 24  THNPFLVLLAYLVACAASFATLDMAERVGNAENPASQRLWRWVGACCLSGGIWAMHFISM 83

Query: 64  LALRLPFALGFDLGITALSLLIAVLSSGFALWLISQPRLPAWQLAFGALVMGTGIACMHY 123
           LA + P  + +DL  T LSLLIA +++  A+  +S  +L   Q    ++ +G GIA MHY
Sbjct: 84  LAFQAPIDIHYDLPATLLSLLIAFIAAFVAMNTLSNAQLNVRQYVQTSICIGLGIATMHY 143

Query: 124 TGMAAMRMTPGIDYDPTLFGASLLIAVAASGAALWIAHNLRRNAPYV-RLARGGAAVVMG 182
            GM AMR      Y P +FG S+LIA+ AS  AL ++H LR       ++ +  A++V+G
Sbjct: 144 VGMTAMRSNAVAHYQPIVFGLSVLIAIGASAIALLLSHGLRNGGGIAHQVLKYTASLVLG 203

Query: 183 FAIVGMHYTGMAAARFADDSVCGAALNGLSGKGLDNLVLVTTLAVLAIALLTSLLDARLE 242
             IV MH+TGM +      +     L+       D+L L  T+A++A+ ++ S + A L 
Sbjct: 204 AGIVSMHFTGMQSMSLVLPTGVPMQLSVDD----DHLQLALTIALIALVVIGSSISAALA 259

Query: 243 -----------ARTAVLADSLTLANQELTHLALHDMLTGLPNRTLLADRIQQAMQVVKEQ 291
                       R   L   L  A   L  +A +D LT L NR        + +      
Sbjct: 260 DKKLQHKDHDLRRVNALLSQLDQARMSLQQVAHYDPLTNLINRRGFNQIFAEKLIEKSTH 319

Query: 292 GGCFALMFIDLDGFKPVNDAFGHHMGDQLLREVGLRLREDLRSQD-TLARIGGDEFVLLV 350
           GG  A+MF+D+D FK +ND+ GH  GD+LL+ +   ++   RS D  +AR GGDEF +L+
Sbjct: 320 GGMLAVMFLDIDHFKRINDSLGHDAGDELLKVLASHIKSSTRSHDDVVARFGGDEFCILI 379

Query: 351 QLTQPDDALGLAERQVILINRAFQVAEHELKISASVGIAMFPGNGHNPQELLMNADAAMY 410
            L + D+A  +A+R +  +    ++A   + ++ S+GI++FP +G   +ELL +AD A+Y
Sbjct: 380 NLRERDEARHMAQRIMQKMKEPIELAGRRMVMTTSIGISVFPDDGKTCEELLKHADLALY 439

Query: 411 HAKGMGKNGYSFFDASMNTNARKQLQLLQDLRNAVEQEQ-FRLYYQPKCDAVSGIPVGAE 469
            +KG G+NG  FF +++ T A   LQL ++LRNA+  E    LYYQP  D  SG     E
Sbjct: 440 QSKGNGRNGLHFFSSNLKTKATMALQLEEELRNALRDEDGLMLYYQPIYDLKSGQVTKLE 499

Query: 470 ALLRWEHPQQGLLLPAMFIELAEKTGLIIPIGEWVLNEACRQMSLWYAQGYEDWRIAVNL 529
           AL+RW+HP  GLL P  FI +AE  GLI  +  WVL +AC  +S     G E  +IAVN 
Sbjct: 500 ALIRWQHPIHGLLAPDRFIAIAEANGLIAELDNWVLRKACEDLSELSRHGCESLKIAVNC 559

Query: 530 SALQFCHAGLVKSVADALERHQLPANNLTLEITETTAMSDADASMTVLQQLSDMGVDLSI 589
           S L      L + V  AL    +    L LE+TE   M +   ++ +L+++  +GV LSI
Sbjct: 560 SPLNLAREELAEEVESALRAAGVSPQRLELEVTENALMGNIANTLVLLRKIRALGVSLSI 619

Query: 590 DDFGTGYSSLMYLKRLPANELKIDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGV 649
           DDFGTGYSSL YLKRLP N LKIDR F++D+   + D  IV AI+ +   L L++V EGV
Sbjct: 620 DDFGTGYSSLAYLKRLPLNTLKIDRSFIQDIPKATQDMEIVQAIIVMAHTLHLQVVTEGV 679

Query: 650 ETDVQQSFLTRLGCNSLQGYLLGHPLP 676
           ET  Q  FL R GC+ +QGYLL  P+P
Sbjct: 680 ETLEQYQFLERFGCDFVQGYLLSRPVP 706



 Score = 40.0 bits (92), Expect = 4e-07
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)

Query: 3   IGSYSPSLVVISLFVAILASYTALDLSGRIATANGRTVYLWITGGAIAMGVGVWSMHFIG 62
           +  Y P +  +S+ +AI AS  AL LS  +    G    +     ++ +G G+ SMHF G
Sbjct: 154 VAHYQPIVFGLSVLIAIGASAIALLLSHGLRNGGGIAHQVLKYTASLVLGAGIVSMHFTG 213

Query: 63  MLALRL------PFALGFDLGITALSLLIAVLS 89
           M ++ L      P  L  D     L+L IA+++
Sbjct: 214 MQSMSLVLPTGVPMQLSVDDDHLQLALTIALIA 246