Pairwise Alignments

Query, 698 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 696 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Xanthomonas campestris pv. campestris strain 8004

 Score =  700 bits (1807), Expect = 0.0
 Identities = 367/682 (53%), Positives = 477/682 (69%), Gaps = 3/682 (0%)

Query: 2   LIGSYSPSLVVISLFVAILASYTALDLSGRIATANGRTVYLWITGGAIAMGVGVWSMHFI 61
           ++G+Y+ SLV++SL VA+LASYTAL L+ R+  + G     W+ GGAIAMG G+WSMHF+
Sbjct: 1   VLGTYNLSLVLLSLAVAVLASYTALHLAARMTASRGGIAAAWLVGGAIAMGFGIWSMHFV 60

Query: 62  GMLALRLPFALGFDLGITALSLLIAVLSSGFALWLISQPRLPAWQLAFGALVMGTGIACM 121
           GMLA +LP  LG+DL +TA S+L+A+L+S  ALWL S+  LP  +L+ GAL+MG GIA M
Sbjct: 61  GMLAFQLPIPLGYDLALTAYSMLVAILASALALWLTSRADLPWRRLSLGALLMGLGIALM 120

Query: 122 HYTGMAAMRMTPGIDYDPTLFGASLLIAVAASGAALWIAHNLRRNAPYVRLARGGAAVVM 181
           HY GMAAMRM P I YDP LF  S+ IA+ AS A LWIA  LR +     L R  AA++M
Sbjct: 121 HYMGMAAMRMDPEITYDPLLFAVSVAIAIGASAAGLWIAFQLRHDGRRYSL-RVVAAMIM 179

Query: 182 GFAIVGMHYTGMAAARFADDSVCGAALNG--LSGKGLDNLVLVTTLAVLAIALLTSLLDA 239
           G AIVGMHYTGMAAA+FA  S+CGAA  G  L    L ++V   TL +L +AL+ S+L  
Sbjct: 180 GVAIVGMHYTGMAAAQFAPGSICGAAGIGAQLPLSWLASVVAAVTLGLLGLALVISVLSR 239

Query: 240 RLEARTAVLADSLTLANQELTHLALHDMLTGLPNRTLLADRIQQAMQVVKEQGGCFALMF 299
           R + RT VLA SL  ANQEL   ALHD LT LPNR LL + + Q+++  +  G  FA+M 
Sbjct: 240 RFQQRTDVLAQSLAQANQELVLAALHDPLTRLPNRVLLHEHVLQSIERGQRDGQRFAVML 299

Query: 300 IDLDGFKPVNDAFGHHMGDQLLREVGLRLREDLRSQDTLARIGGDEFVLLVQLTQPDDAL 359
           IDLDGFK VND +GH +GDQLL  V  RL    R+  +LAR+G DEFVL+  +  P+DA 
Sbjct: 300 IDLDGFKAVNDGYGHQLGDQLLIAVAQRLGAHRRAHGSLARLGADEFVLVADIADPEDAA 359

Query: 360 GLAERQVILINRAFQVAEHELKISASVGIAMFPGNGHNPQELLMNADAAMYHAKGMGKNG 419
            +A   V  +   F V +HEL++S+SVGIA++P +  +  +L+ +ADAAM HAK  G+N 
Sbjct: 360 AIAGHLVQALALPFLVGDHELRLSSSVGIALYPEDAGSEHQLMTHADAAMGHAKQAGRNR 419

Query: 420 YSFFDASMNTNARKQLQLLQDLRNAVEQEQFRLYYQPKCDAVSGIPVGAEALLRWEHPQQ 479
           YSFFD SM    R++LQLLQDL  A+E  QF L+YQPK  A  G P+GAEAL+RW HP++
Sbjct: 420 YSFFDRSMTGTTRERLQLLQDLPRALELGQFALHYQPKYCAEDGRPLGAEALIRWLHPER 479

Query: 480 GLLLPAMFIELAEKTGLIIPIGEWVLNEACRQMSLWYAQGYEDWRIAVNLSALQFCHAGL 539
           G++ P  FI LAE++G+I P+G+WVL EACRQM  W   G+ DWR+AVNLSA Q     L
Sbjct: 480 GMVPPDSFIPLAERSGMIGPLGKWVLEEACRQMRAWRDAGHGDWRVAVNLSATQLASPSL 539

Query: 540 VKSVADALERHQLPANNLTLEITETTAMSDADASMTVLQQLSDMGVDLSIDDFGTGYSSL 599
              VA  L  H +    LTLEITET AM DADA +  L QL+D+GV ++IDDFGTGYS+L
Sbjct: 540 PAEVAATLAAHAIAPGQLTLEITETMAMRDADACLRTLGQLTDLGVRIAIDDFGTGYSNL 599

Query: 600 MYLKRLPANELKIDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGVETDVQQSFLT 659
           +YL++LPA+ELKIDR FV+ ++   +D AIV+A+VAL   + L++VAEGVET  Q++ L 
Sbjct: 600 LYLRKLPAHELKIDRSFVQAMDSGPEDIAIVAAVVALAHTMRLQVVAEGVETPAQRNTLE 659

Query: 660 RLGCNSLQGYLLGHPLPAEGFM 681
           RLGC+ LQGYLLG P+  + F+
Sbjct: 660 RLGCDQLQGYLLGRPMEPDRFI 681