Pairwise Alignments

Query, 1035 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  506 bits (1302), Expect = e-147
 Identities = 312/1019 (30%), Positives = 533/1019 (52%), Gaps = 24/1019 (2%)

Query: 1    MNLSGPFIRRPVATMLLSLAIMLLGGVSFNLLPVSPLPQIDFPVIVVSASLPGASPEVMA 60
            M LS   ++RPVA ++LS+ + + G VSF  L V  +P I+ PV+ VS    GAS  ++ 
Sbjct: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60

Query: 61   STVATPLERSFGSIAGITTMSSSSSQGSTRVILAFDSDRDINGAAREVQAAINASRNLLP 120
            S + + LE     I+GI  ++S S  G +R+ + F+   D+N    +++ A+  ++  LP
Sbjct: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120

Query: 121  SGMRSMPTYKKINPSQAPIMVLSLTSDVLQKGQLYDLASTILSQSLSQVPGVGEVQIGGS 180
                    +K     QA + + +L+S  + + QL D    +L    S + GV  V + G 
Sbjct: 121  EEADDPQVFKNNGSGQASVYI-NLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGG 179

Query: 181  SLPAVRIELEPKALDQYGVALDDVRNTIANANQRRPKGSLEDSQRNWQIQANDQLEKAKD 240
                + + ++P+ +   GVA  D+ + +   N   P G + +      ++     + A+D
Sbjct: 180  LYKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAED 239

Query: 241  YEPLLI-RYQNGAALRLGDVAKISDGVEDRYNSGFFNNEPAVLLVINRQSGANIIETVRQ 299
            +E L++ R  +G  + L DVA +  G E+  ++   +    V + I  QS AN +E  ++
Sbjct: 240  FEYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKR 299

Query: 300  IKAQLPALQAVLPSSVKLSLAMDRSPVITATLHEAEMTLLIAVGLVILVVYLFLGNFRAS 359
            +  ++  +Q  LP   +L++  D +  I  ++ E   TL I  GLVILV+Y+F+G  RA+
Sbjct: 300  VHEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRAT 359

Query: 360  LIPTLAVPVSLVGTFAVMYLYGFSLNNFSLMALILATGLVVDDAIVVLENISRHIDEGVP 419
            LIP + VPVSL+  F   Y +GFS+N  +LMALIL+ GLVVDDAIVV+ENI  HI+ G  
Sbjct: 360  LIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEK 419

Query: 420  PMKAAYLGAQEVGFTLLSMNVSLVAVFLSILFMGGIVTNLFREFSITLSAAIIVSLIVSL 479
            P+ AAY G +EVGF +++  + LV VFL I FM G+V  LF EFS+ L+ A+I S +++L
Sbjct: 420  PLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIAL 479

Query: 480  TLTPMLCARWLKPHVK-GQMTGLQRWSQKINDRMVAGYATSLDWVLRHRRLTLLSLLLTI 538
            TLTP+L ++ LK +VK G+   L     ++  R+ +GY   +   +R R    + +   I
Sbjct: 480  TLTPVLGSKLLKANVKPGRFNQL---IDRLFARLESGYRQVVSRAIRWRWAAPVVIAACI 536

Query: 539  GLNVALYVVVPKTFMPQQDTGQLIGFVRGDDGLSFSVMQPKMETFRKAV--------LKD 590
            G +  L  +VP    P +D G +  FVRG D  S++ M   M+   + +        LK 
Sbjct: 537  GGSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKS 596

Query: 591  PAVLSVAGFIGGNNGTNNAVMLVRLKPISERKISAQAVIERLRKDVPLVPGGRLFLMADQ 650
             ++ S A   GGN G     +++ L+  ++R ++AQ  + ++RK +  +P  R+F     
Sbjct: 597  FSIQSPA--FGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPF--- 651

Query: 651  DLQFGGSRDQTSAQYSYILQSGDLAALRLWYPKVVAALRELPELTAIDAREGRGAAQVTL 710
                 G R  ++    ++L   D + L+ W  K+     + P +T  D        ++ +
Sbjct: 652  ---MPGFRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVV 708

Query: 711  IVDRDQAKRLGIDMDMVTSVLNNAYSQRQISTIYDSLNQYQVVMEVNPRYAQDPITLNQM 770
             +D+ +A  LGI +  ++  L      ++++T  +   +Y V +  +     +   L+Q+
Sbjct: 709  TIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQI 768

Query: 771  QVITADGARVPLSTIAHYENSLADDRVSHEGQFASENIAFDMAPGVTVEQGTAAIERAIA 830
             + TA G  V L T+   +   +  R++H  +  S  I  ++  G T+ Q    +++   
Sbjct: 769  YMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQ 828

Query: 831  KVGLPEDVIAKMAGTADAFAATQKGQPFMILGALVAVYLVLGILYESYIHPLTILSTLPS 890
            ++ LP D+    +G +  F   Q     +   AL+  YLVL   +ES+I+PL ++ T+P 
Sbjct: 829  EI-LPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPM 887

Query: 891  AGVGAMLAIYLTGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHDGMSPLESIRSA 950
               G  L +++ G   ++ S +G+ +LIG+V KN IL+++ A QL R  G+   ++I  A
Sbjct: 888  GVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQL-RDRGVEFEKAIIDA 946

Query: 951  CLLRLRPILMTTLAAILGALPLLLGAGDGAEMRRPLGLTIIGGLVFSQILTLYTTPVVY 1009
               RLRPILMT    + G++PL++  G G E R  +G  I  G+ F+ ++TL   P +Y
Sbjct: 947  SARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMY 1005