Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 292 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  128 bits (322), Expect = 1e-34
 Identities = 79/243 (32%), Positives = 131/243 (53%), Gaps = 3/243 (1%)

Query: 1   MDIKQLKFLIALDDTRHFGQAAARCHITQPTLSMRLRNLEEELDLPLVNRGQRFEGFTAP 60
           M+I+ L +   L   +HF +AA  CH+TQPTLS  +  LE+ L   LV RG +F   T  
Sbjct: 1   MNIRHLHYFQQLAQLQHFAKAANACHVTQPTLSAGISALEKSLGTELVVRGSQFVALTDA 60

Query: 61  GERVLAWARTVLAAYDGLQAEAAACRGNLVGTLRLGVVPLSSFDPLALMQQLHKEHPSLR 120
           G+ +L +A  +L     L+ E +  RG L G+LR+G+VP SS D + L++  ++ +P++ 
Sbjct: 61  GQIMLQYAERMLQEQAALKQELSLFRGQLTGSLRIGIVPQSSIDIMPLIKLFNQAYPNIS 120

Query: 121 FELSALSSEQILEQLASNRLDLGVSYLERLDNERFDSLALGETR---MGLLYDQRFFSFG 177
            +LS +++ Q++E L+ ++ D+G+ + E+L      S      R   M LL         
Sbjct: 121 IKLSVMTNGQLIESLSLHKTDIGLGFDEQLTEANRRSFVFYPQRANQMALLSCDSVDDSA 180

Query: 178 DTPLSWEALIKLPLGMLTSGMHFRQSIDHNFHSRGLIPQPLLQTDAVHQLLQAVHGGLCC 237
              LS   +   PL +L+  M FR+ ID+     G+    +L+TD++  L+ AV  GL  
Sbjct: 181 SKCLSLYDIGTRPLVLLSQNMQFRKYIDNAMAQAGIDFNLVLETDSLFHLIGAVKHGLGS 240

Query: 238 AVM 240
           A++
Sbjct: 241 AIV 243