Pairwise Alignments

Query, 1033 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 1034 a.a., Cation/multidrug efflux pump from Pseudomonas stutzeri RCH2

 Score =  916 bits (2367), Expect = 0.0
 Identities = 486/1027 (47%), Positives = 690/1027 (67%), Gaps = 10/1027 (0%)

Query: 1    MNLSRLFILRPVATTLSMLAIVLAGIIAYRLLPVSALPQVDYPTIRVMTLYPGASPDVMT 60
            MNLS  FI RPVAT L  LAI+L G +++ LLPVS LP +D+P I V    PGASP++M 
Sbjct: 1    MNLSAPFIARPVATMLLSLAILLLGGVSFGLLPVSPLPNMDFPVITVQASLPGASPEIMA 60

Query: 61   SAVTAPLERQFGQMPGLTQMASTSSGGASVLTLRFNLDINMDVAEQQVQAAINAATNLLP 120
            S+V  PLER  G + G++QM S SS G++ + ++F+LD +++ A + VQAAINA+ NLLP
Sbjct: 61   SSVATPLERSLGSIAGVSQMTSRSSQGSTRIIIQFDLDRDINGAARDVQAAINASRNLLP 120

Query: 121  KDLPAPPVYNKVNPADTPVLTLAITSKTMLLPKLNDLVDTRMAQKIAQISGVGMVSIAGG 180
              + + P Y K+NP+  P++ L++TS+ +   +L D+  T +AQK++Q+SGVG + + G 
Sbjct: 121  SGMRSMPTYRKINPSQAPIMVLSLTSEVLDKAELYDIGSTILAQKLSQVSGVGEIQVGGS 180

Query: 181  QRQAVRIKVNPEALAANGLNLSDVRTLIAASNVNQPKGNFDGPTRVSMLDANDQLVSPQQ 240
               AVR+++ P+ L   G++L +VR  IA  NV +PKG  +   +   + ANDQL     
Sbjct: 181  SLPAVRVELQPQQLEQYGVSLDEVRQTIANGNVRRPKGMVEDADQHWQVRANDQLHQAAD 240

Query: 241  YAELILAYNNGAPLRLKDVAQIVDGAENERLAAWANQNQAVLLNIQRQPGANVIEVVDRI 300
            Y  LI+ Y +GA LRL DVA++ D  E+   + + N  QAVLL + RQ GAN+IE ++ I
Sbjct: 241  YTPLIIRYQDGAALRLGDVARVRDSVEDRYNSGFFNNEQAVLLIVNRQAGANIIETIEGI 300

Query: 301  KALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRVSATL 360
            +  LP++   +P  +D+ +  DR+  IRA++ + +  LLIA+ LV+++ FLFL R+   L
Sbjct: 301  RRELPALQAIMPGSVDLNIAMDRSPVIRATLHEAERTLLIAVGLVIVLVFLFLGRLRTAL 360

Query: 361  IPSIAVPLSLVGTFGVMYLAGFSINNLTLMALTIATGFVVDDAIVMLENISRYIEEGETP 420
            IP++AVP+SLVGTF VMY+ GFS+N L+LMAL +A G VVDDAIV+LENI+R+I++G  P
Sbjct: 361  IPALAVPVSLVGTFAVMYMFGFSLNVLSLMALILAAGLVVDDAIVVLENIARHIDDGMPP 420

Query: 421  LAAALKGAKQIGFTLISLTLSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480
            L AA  G +++GFTL+S+ LSL+ V + +L+M  +V RLFREF+ITLA AIL+SL+VSLT
Sbjct: 421  LKAAYVGTREVGFTLLSMNLSLVVVFVSILYMGGIVERLFREFSITLAAAILVSLLVSLT 480

Query: 481  LTPMMCARLLK-REPKEEEQSRFYKASGAWIDWLIARYGSMLQWVLKHQPLTLLVAIATL 539
            LTPM+CAR LK  EP  E++ R  + S     WL+  Y   L W L+H+ +TLL  +AT+
Sbjct: 481  LTPMLCARWLKPHEP--EKEGRLQRWSHDAHQWLLRYYDRSLSWALRHRRITLLSLLATI 538

Query: 540  GLTVVLYLVVPKGFFPVQDTGVIQGISEAPQSISFAAMSQRQQELAKIILADPAVESLSS 599
             L VVLY+ VPK F P QDTG I G       +SF  M  + +   K +LADPAVES++ 
Sbjct: 539  ALNVVLYVQVPKTFLPQQDTGQITGFIRGDDGMSFQVMQPKMEIFRKAVLADPAVESVAG 598

Query: 600  YIGVDGDNATLNSGRLLINLKAHGQRDLSAAQVITRLQPEIDRLVGIRLFMQPVQDLTI- 658
            +IG  G    +N+  +++ LK   +R +SA +VI R++    ++ G R+F+   QDL   
Sbjct: 599  FIGGQGG---INNAFMIVRLKPLNERGISAQKVIERIRKNQPKVPGGRMFLMADQDLQFG 655

Query: 659  EDRVSRTQYQFSMSSPDAELLALWSDKLVHALSQLPELTDVASDLQDKGLQVYLVIDRDA 718
              R S + Y +++ + D   L  W  ++  ALS LPELT + ++  +   Q+ L IDRDA
Sbjct: 656  GGRQSSSAYAYTLLASDLNDLRTWVPQVTRALSDLPELTSIDANDGEGAQQISLKIDRDA 715

Query: 719  ASRLGVSVSTITDALYDAFGQRQISTIYTQASQYRVVLQAQSGETLGPEALNQIHVKTTD 778
            A RLG+ +ST+T  L +AF QRQISTIY   +QY+VV++        PE L QIHV T+D
Sbjct: 716  AKRLGIDMSTVTTLLNNAFSQRQISTIYESLNQYQVVMEIDPSYAQYPEVLEQIHVVTSD 775

Query: 779  GGQVRLSSLAHVEQRQAQLAIAHIGQFPAVMMSFNLAPGVALGKGVELINQTQKDIGMPV 838
            G +V L++ A  E+   +  ++H GQF A  + F+LAPGV+L +    I +    IGMP 
Sbjct: 776  GRRVPLAAFARYERSLEEDRVSHDGQFAAENIDFDLAPGVSLDQATLAIERAVAAIGMPS 835

Query: 839  GVQTQFQGAAQAFEASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGAL 898
             VQ +  G   AF+ +     L+IL A++ +YIVLG+LYESYIHP+TILSTLPSA VGAL
Sbjct: 836  EVQGRLGGTGSAFQTTQEGQPLMILGALLLVYIVLGILYESYIHPLTILSTLPSAGVGAL 895

Query: 899  LALLLSGNDLGMIAIIGIILLIGIVKKNAIMMIDFALDAERNQGLDPQTAIYQAALLRFR 958
            LA++L+G+   +I+++G+ LLIG+VKKNAI+MID AL  ER   L P  +I++A LLRFR
Sbjct: 896  LAIILTGDQFSLISLLGLFLLIGVVKKNAILMIDLALQFERQDKLSPADSIHRACLLRFR 955

Query: 959  PILMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLG 1018
            PILMTT+AA+ GA+PL+L    GAE+RQPLGL ++GGLL+SQ+LTL+TTPV+YLY DRL 
Sbjct: 956  PILMTTMAAILGALPLLLGGAEGAEMRQPLGLTIIGGLLLSQILTLYTTPVVYLYLDRLR 1015

Query: 1019 RR---WR 1022
             R   WR
Sbjct: 1016 HRFNSWR 1022