Pairwise Alignments

Query, 276 a.a., ABC transporter for D-Mannitol and D-Sorbitol, permease component 1 (from data) from Pseudomonas simiae WCS417

Subject, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  142 bits (358), Expect = 9e-39
 Identities = 90/318 (28%), Positives = 155/318 (48%), Gaps = 42/318 (13%)

Query: 1   MTLQQSRRLQSLLLGTLAWAIAILIFF--PIFWMVLTSFKTEIDAFATPPQFIFTPTLEN 58
           M   Q+R  ++L    +A  + I + F  PI+W+  T+FK    A   PP  IF P +  
Sbjct: 1   MAAVQTRSERALNRVAIAAVLVITLLFLAPIYWITSTAFKPRNLATTIPPTVIFEPEISP 60

Query: 59  YLHI----------NERSNYFSYAW------------------------------NSVLI 78
           ++ +           E  +Y +  W                              NS+++
Sbjct: 61  FVKLFTKRSQLRSAPEPEDYAAAPWWERLVFDGGEKVVRSGRGQVQLSGYPNRFMNSLIV 120

Query: 79  SFSATALCLLISVPAAYSMAFYETQRTKGTLLWMLSTKMLPPVGVLMPIYLLAKSFGLLD 138
           + ++T L + +    AY  + ++ +     L ++LST+MLPPV V +P++L+ ++ GL D
Sbjct: 121 AITSTVLAVAMGTFTAYGFSRFKVKGEADLLFFILSTRMLPPVVVAIPMFLMYRAVGLND 180

Query: 139 TRIALIIIYTLINLPIVVWMVYTYFKDIPKDILEAARLDGATLWQEMVRVLLPIAKGGLA 198
           T   LII+YT  NL   VW++  +  +IPK+  EAA +DG T  +   +++LP A  G+A
Sbjct: 181 THWGLIILYTAFNLSFSVWLMKGFIDEIPKEYEEAALVDGYTRLEAFFKIVLPEAATGIA 240

Query: 199 STVLLSLILCWNEAFWSLNLTSSSAAPLTALIASYSSPEGLFWAKLSAVSTLACAPILIF 258
           +T +   I  WNE  ++L +T+  A      I S        W  ++A + L   P+ IF
Sbjct: 241 ATAVFCFITAWNEYAFALIMTNRRAQTAPPFIPSQVGSGLPDWTVIAAGTFLFLLPVAIF 300

Query: 259 GWISQKQLVRGLSFGAVK 276
            ++ +  L+RG+SFGA++
Sbjct: 301 TFLLRNHLLRGMSFGAIR 318