Pairwise Alignments

Query, 1030 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1052 a.a., Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 1262 bits (3265), Expect = 0.0
 Identities = 636/1030 (61%), Positives = 796/1030 (77%), Gaps = 3/1030 (0%)

Query: 1    MPQFFIDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDES 60
            M Q FI RPI AWV A+FI +AG++A+P LPVAQYPNVAPP++ +Y  YPGAS Q + + 
Sbjct: 1    MAQLFIKRPILAWVFAIFISIAGIIALPLLPVAQYPNVAPPQLSLYTTYPGASPQEIYQG 60

Query: 61   VVSLIEQELNGADHLLYFESQS-SLGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQ 119
            V  LIE+ELN  D+L+YFES S S G  TI ATFQPGTN + A V+VQN +++V  RLP 
Sbjct: 61   VTRLIEEELNSVDNLIYFESTSDSTGGITINATFQPGTNLQQASVNVQNAIRSVASRLPA 120

Query: 120  AVTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGA 179
            AVT QG+ VE+V+AGFL+L+TLTS DG +D+V L DYL RN++ EL+R+DGVGKAQL+ A
Sbjct: 121  AVTAQGVTVEEVTAGFLMLITLTSTDGAVDEVGLGDYLNRNMLGELRRIDGVGKAQLFSA 180

Query: 180  ERAMRVWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTNTQEITAAILVKGQL 239
            +RAMRVWIDP K++G  LT  D+N AI+ QNAQV+AG IG  P   +Q++TA +LVKGQL
Sbjct: 181  QRAMRVWIDPDKMVGLKLTVGDINTAITTQNAQVAAGQIGAAPNPVSQDLTATVLVKGQL 240

Query: 240  STPAEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANAL 299
            +   EF +IVL+ANPDGSTVR+ DVAR+EVG++ Y FS+RLNG+PS AV++QLS   NA+
Sbjct: 241  TDIEEFGNIVLRANPDGSTVRLKDVARLEVGAESYNFSSRLNGQPSAAVAIQLSSTGNAV 300

Query: 300  NTATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQ 359
             T+  ++AK+DELSR+FP+ V+Y +PYDTSPFV  SI KV+ TLLEA+ LVF VMF+FLQ
Sbjct: 301  ATSAAIKAKLDELSRFFPSGVQYDVPYDTSPFVSASIQKVLMTLLEAVGLVFLVMFVFLQ 360

Query: 360  NVRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 419
            N RYT+IPTLVVPIAL+GT A ML  GFSINVLTMF MVLAIGILVDDAIVVVENVERIM
Sbjct: 361  NFRYTVIPTLVVPIALLGTSAAMLATGFSINVLTMFAMVLAIGILVDDAIVVVENVERIM 420

Query: 420  ATEGLSPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILF 479
            A EGLSPK AT KAM QIT AI+GITLVL +VF+PMAF  GS G+IY+QFSL+M  SILF
Sbjct: 421  AEEGLSPKAATNKAMTQITSAILGITLVLSSVFIPMAFFPGSTGIIYRQFSLTMVVSILF 480

Query: 480  SAFLALTLTPALCATLLKPIAKGEHHAKGGFFGWFNTRFEQLTDRYEGWVAYALKRSGRY 539
            SAFLAL+LTPALCAT LKPI +G HH K G  GWFN +F++LT  Y   V   ++R+GR 
Sbjct: 481  SAFLALSLTPALCATFLKPIKQG-HHDKKGLGGWFNRKFDRLTAGYSRSVTGLVRRAGRV 539

Query: 540  LLIYLVLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAHNAEE 599
            +++YL L+VGLG++F  LPS F+P EDQGY + D+Q PP AS NRTV   +QIE     E
Sbjct: 540  MVVYLALVVGLGYLFVNLPSGFVPNEDQGYFLVDVQGPPEASANRTVASIKQIEEIFKGE 599

Query: 600  PGVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERSSDDSASSIADRANMAFSELKDAIAY 659
              V D  +I GFSFSGSG NAA+ F TLKDW ER + ++   I +R NM    LKDA ++
Sbjct: 600  SAVRDVLVIQGFSFSGSGANAAMVFVTLKDWKERGAGNTVDEITERVNMRLFALKDATSF 659

Query: 660  AVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSPILANVRESALAEAP 719
            A+ PPP++G GT++GF FRLQDR G+G  AL +A  +L+A AE+SP+L  +R   L +A 
Sbjct: 660  ALSPPPIEGFGTTNGFSFRLQDRSGLGQQALSSAAAKLMAKAEQSPVLTGLRIEGLPDAA 719

Query: 720  QVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQVAD 779
            QV L ++R++AN  GV+FAD+ + +++ +GS+YIND+PN GRMQRV+VQA+   R Q  D
Sbjct: 720  QVVLVINREKANTFGVTFADINSTITANLGSSYINDYPNAGRMQRVIVQAQDRDRLQADD 779

Query: 780  LMKINVRNNAGKMVPLSAFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMDEIQ 839
            L+K+NVRN  G MVPLS+F  A+W +G  Q+  YNGYP + I+GE  PG STG A+ E++
Sbjct: 780  LLKLNVRNAGGGMVPLSSFAIAEWQKGAPQIVGYNGYPTVRIAGEPVPGQSTGAAIAEME 839

Query: 840  RLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTSVLLVV 899
            RL S+LP G G EWTG +L+E  SG+QAP+L GLS+L VFL LA LYESWSIP SV+LVV
Sbjct: 840  RLASELPEGFGFEWTGQALEEIKSGSQAPMLFGLSILFVFLLLAGLYESWSIPLSVMLVV 899

Query: 900  PLGVLGAVIAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLVTATLK 959
            PLG +G V+AV +RGMPND++FKVGLI IIGLSAKNAILI+EFAKD + QG  L  + + 
Sbjct: 900  PLGAIGCVLAVMMRGMPNDIYFKVGLIAIIGLSAKNAILIVEFAKDYFAQGRSLFDSAVD 959

Query: 960  AARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITAT-LAVVFVPVFF 1018
            AAR+R RPI+MTSLAF LGVVPLAIATG S+ASQ AIGTGV+GG+I  T LA+ FVP FF
Sbjct: 960  AARVRFRPIVMTSLAFALGVVPLAIATGPSAASQNAIGTGVLGGIILGTILAIFFVPAFF 1019

Query: 1019 VVVMKLMKKK 1028
            V V+KL + K
Sbjct: 1020 VFVLKLFRTK 1029