Pairwise Alignments

Query, 1030 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1043 a.a., multidrug efflux RND transporter permease subunit from Rhodopseudomonas palustris CGA009

 Score = 1206 bits (3119), Expect = 0.0
 Identities = 615/1025 (60%), Positives = 778/1025 (75%), Gaps = 2/1025 (0%)

Query: 1    MPQFFIDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDES 60
            M  FFI RPIFAWVVA+FI LAG+LA+P LPVAQYP +APP + I  VYPGAS Q L   
Sbjct: 1    MASFFIARPIFAWVVAIFICLAGVLALPFLPVAQYPIIAPPSISIATVYPGASTQNLYYG 60

Query: 61   VVSLIEQELNGADHLLYFESQS-SLGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQ 119
            V  LIE+ELNGA  +L +ES S + G   I A+FQPGT+   A VDVQNR+K +EPRLP+
Sbjct: 61   VTRLIEEELNGAAGILSYESTSDTTGEVEIVASFQPGTDIAQATVDVQNRIKRIEPRLPE 120

Query: 120  AVTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGA 179
            AV ++G+ + + S+  L  VTLTS+D  LD++ L D   R V+ EL+RL GVG+ +L+  
Sbjct: 121  AVRKEGIAITEASSAILQFVTLTSSDNSLDEIGLGDVATRYVLPELRRLRGVGRVRLFST 180

Query: 180  ERAMRVWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTNTQEITAAILVKGQL 239
            ERAMR+W+DP KL+G  LT  DV++AI+AQNA V++G +G  P    Q +   +LVKGQL
Sbjct: 181  ERAMRIWLDPDKLLGLGLTAQDVDSAIAAQNAPVASGLLGVQPTPVQQRLQNMVLVKGQL 240

Query: 240  STPAEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANAL 299
             +  EF DIVL+ANP+GSTVR+ DVAR+EVG   Y FSTRL+G+P+ AV+VQL+P  NAL
Sbjct: 241  DSLEEFGDIVLRANPNGSTVRLADVARLEVGGLAYSFSTRLDGRPAAAVAVQLAPSGNAL 300

Query: 300  NTATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQ 359
             T+  V+A+M EL+ +FP  V+Y++ YD +P +  S+ KV+ TL EA+ LVF VMFLFLQ
Sbjct: 301  ATSEAVKARMAELAAFFPPGVKYEVSYDVTPVIAASVKKVLLTLAEAVVLVFLVMFLFLQ 360

Query: 360  NVRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 419
            N+RYT+IPT+VVPIAL+GT A +L LGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM
Sbjct: 361  NIRYTMIPTIVVPIALLGTCAVLLGLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 420

Query: 420  ATEGLSPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILF 479
            + EGLSP+ AT+KAM QITGA+IGITLVL+AVF+PMAF  GSVG++YQQFS +M  SI F
Sbjct: 421  SEEGLSPRAATEKAMEQITGAVIGITLVLMAVFVPMAFFPGSVGIMYQQFSAAMVVSIGF 480

Query: 480  SAFLALTLTPALCATLLKPIAKGEHHAKGGFFGWFNTRFEQLTDRYEGWVAYALKRSGRY 539
            SAFLAL+LTPALCATLLKP+ KG  HA  GFFGWFN R ++ T  Y     + + R GR+
Sbjct: 481  SAFLALSLTPALCATLLKPVEKGHGHATRGFFGWFNRRLDRATRSYGNATRWMVARGGRF 540

Query: 540  LLIYLVLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAHNAEE 599
            +L+Y+VLL  L + F RLP  F+P++DQG+ + D+  P  AS NRT  V   +E   A  
Sbjct: 541  MLLYVVLLAVLSFAFWRLPGGFVPIDDQGFVMVDVLAPSDASANRTADVVRSVEKTLAAT 600

Query: 600  PGVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERSSDDSASSIADRANMAFSELKDAIAY 659
            PG+   T I GFSF G G N A AF +LKDWSERSS++SA ++  R N  F++++DA   
Sbjct: 601  PGIDKVTFITGFSFFGQGANTAQAFVSLKDWSERSSNESADALIARLNPEFAKIRDADVS 660

Query: 660  AVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSPILANVRESALAEAP 719
             + PPP+D LGT+SGF FRLQDR   G+ ALM A+ ELLAAA +SP+L++V    L  AP
Sbjct: 661  VLAPPPIDNLGTTSGFSFRLQDRSQRGYDALMVAKDELLAAAARSPVLSSVTVEGLPPAP 720

Query: 720  QVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQVAD 779
            QV+L++DR++A ALGV+FA +   LS+ +GS+YINDF N GRMQRVVVQA  D+R +  D
Sbjct: 721  QVRLDIDRRKAAALGVTFAAINGALSTNLGSSYINDFLNLGRMQRVVVQANEDKRVKPED 780

Query: 780  LMKINVRNNAGKMVPLSAFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMDEIQ 839
            L+  +VRNNAG+MVP S+F    W  GPTQ+  ++GYP++ ++G  APG+S+G+A+ E++
Sbjct: 781  LLSYSVRNNAGEMVPFSSFARVAWVVGPTQVVGFDGYPSVRLTGNPAPGYSSGDAIAEME 840

Query: 840  RLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTSVLLVV 899
            RL+  LP G G  WTG SLQE+L+G+QA  LLGLS+L VFLCLAALYESWSIP +V+L V
Sbjct: 841  RLMRTLPGGFGYAWTGQSLQEKLAGSQAVFLLGLSILFVFLCLAALYESWSIPFAVMLAV 900

Query: 900  PLGVLGAVIAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLVTATLK 959
            PLG++G+V A  LRG+PNDV+  VG++TIIGLSAKNAILIIEFAKDL   G  LV AT+ 
Sbjct: 901  PLGLVGSVAAAMLRGLPNDVYLTVGIVTIIGLSAKNAILIIEFAKDLRAHGTPLVEATIT 960

Query: 960  AARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITAT-LAVVFVPVFF 1018
            AA LR RPIIMTSLAFILGVVPL IA+GAS+ASQQA+GTGV+GGMITAT LAV +VPVFF
Sbjct: 961  AAELRFRPIIMTSLAFILGVVPLVIASGASAASQQALGTGVLGGMITATVLAVFWVPVFF 1020

Query: 1019 VVVMK 1023
            VVVM+
Sbjct: 1021 VVVMR 1025