Pairwise Alignments

Query, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (255), Expect = 8e-27
 Identities = 85/297 (28%), Positives = 132/297 (44%), Gaps = 10/297 (3%)

Query: 3   QINIAQVDLNLLKTFEALHDESSASRAALRLGVTQSAVSAGLRRLREVYGDQLFVRTGRG 62
           +IN+  +DLNLL   E L      S+AA  L ++Q AVS  L RLRE +GD L V+    
Sbjct: 5   EINLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVKNE 64

Query: 63  LAPTLRANQLKPVISEALERCRQSLAMVDPDNQHYQGRSVVLGLSDDFE-IAYGRRLIEA 121
              T +  +L   +   L   R  L     D  HY G   +  L  DFE +    +L+  
Sbjct: 65  YRLTAKGERLCSELERTLNTIRHMLVDDKFDPMHYSGVFTIGAL--DFEMMMIVPKLLAR 122

Query: 122 IAQRAPRLRVIFRQTHSQIVAGALLDRTLDLAITAGGFAQGRLSRQVLGEGDYRCLVDSD 181
             QRAP L++     ++ +     L++  DL + +   +   + +Q L   +Y  ++  +
Sbjct: 123 FQQRAPNLKLQIVPYNAYMPLHDYLEKVADLLLYSTDESPTNVFKQRLFNDNYAVVMCRN 182

Query: 182 ----QASISLEEFVTREHVLVSSGGFIGIT--DEGLAALGLSRQVCASTSHFAALPFLLK 235
                  I+LE +    HV++S  G +G T  D  L  L   R+V AS  HF+ +P LL 
Sbjct: 183 HPLANQPITLESYCQSRHVIISGNG-LGKTDMDHELKKLNYQREVVASLPHFSMVPELLI 241

Query: 236 GSQAVATIPGHAAQAIAQMTGLRVLPCPLALPRYPVELGWRTQAQLDPLLLKVREAI 292
            +  +AT+P      + Q   + V   P     + VE  W       P+   VR+ I
Sbjct: 242 NTDLIATLPRRLVTHLGQRYEITVADLPFYTADFRVEQFWHLIHHSSPIHQWVRQEI 298