Pairwise Alignments

Query, 331 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 328 a.a., Putative FecR (NCBI) from Rhodospirillum rubrum S1H

 Score =  119 bits (297), Expect = 1e-31
 Identities = 94/311 (30%), Positives = 142/311 (45%), Gaps = 27/311 (8%)

Query: 18  AAHWCMRLHAVDCTASERQAFEQWHDAHPLHAFEYAAMLEIW------------DVADHL 65
           AA W  RL   D     R+AF  W    P  A  +     +W            D A  +
Sbjct: 21  AAIWHARLREDD---RHRKAFALWLGEDPRKAEAFRQTERLWAALEAPTAALATDGAALM 77

Query: 66  PRNEPTATVVPFKPRRRLRTYAVAAAICLVALPLAAFTGWEAGWLPSSYERFDATHG--L 123
            R +    ++  +   R    AV  A+ LV  P           L  S    D T     
Sbjct: 78  VRRQRRPPIIWRRSAGRRVALAVVLALGLVLAP-------RGQGLIDSLRADDVTAPGER 130

Query: 124 RQVTLGDGSQVELNLGTQLVYSNYKDQRRVTLKKGEAFFKVSHDTAHPFIVHAGEGQVRV 183
           R + L DGS V LN  + L  +   D RR+ L +GEA+F+V+HD   PF+V  G+G V V
Sbjct: 131 RSLVLADGSVVALNTDSALAVAMGGDHRRLRLFRGEAWFEVAHDARRPFVVETGDGTVTV 190

Query: 184 TGTQFNVWKYEDQVRVTLLEGSVQISSDKVHGSVP-LTPGMQANYQHGDATPRVRTMSPN 242
           TGT+FN+   E   RV+L EG V++S     G V  L PG QA      A   + T    
Sbjct: 191 TGTRFNLRIDEAGTRVSLSEGRVELSPAHAAGQVKILRPGEQA-VVGKTAVGAIDTFDAT 249

Query: 243 DTALAWRQGKLILDNLALADALPLINRYLSKPVMLADANTGTIRIGGIYNINEVNNLVPS 302
                WR+G+++  + AL   +  +NRY   P++LA  +   +R+ G++++++   ++ +
Sbjct: 250 -AVTGWRRGQIVFYDTALRQVVAELNRYRRGPILLARRDLADLRVSGVFDVSDPEGVLAA 308

Query: 303 LPKVLPVYLTQ 313
           L   LPV +T+
Sbjct: 309 LTGTLPVRMTK 319