Pairwise Alignments

Query, 645 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

Subject, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

 Score =  269 bits (687), Expect = 3e-76
 Identities = 139/342 (40%), Positives = 217/342 (63%), Gaps = 10/342 (2%)

Query: 5   LQQVFGFPQFRLGQEETVSAVLAGRSAAAIFPTGSGKSLCYQLSAVLLPHLTLVVSPLLA 64
           L +VFG+ QFR+GQ+E + A LAGR +  I PTG GKSLCYQ+ A++L  +TLV+SPL++
Sbjct: 20  LHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLIS 79

Query: 65  LMQDQLGFLQRHGISAGSIDSAQSRDEANDVMARARSGELKILMISVERLKNERFRNFLQ 124
           LM+DQ+  L+ +G++A  ++S  +R+E   +  R  +G+LK+L +S ER+    F   L 
Sbjct: 80  LMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIERLS 139

Query: 125 SVQISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQALLLTATATPKVIADMQAKF 184
            + ++++ VDEAHCIS+WGH+FRP+Y  L   +++F     + LTATA      D+  + 
Sbjct: 140 HLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIMQRL 199

Query: 185 AIAPGDVVTTGFYRPNLN-LLVE---PVSGADKRRRLVQWMSERAGQPSIVYVTLQKTAE 240
            +         F RPN+  +LVE   PVS      ++++++  + GQ  I+Y   +K  E
Sbjct: 200 QLNEPHQYLGSFDRPNIRYMLVEKHKPVS------QVIRYLETQRGQCGIIYCGSRKKVE 253

Query: 241 QIAEHLNRNGIQAEAYHAGLPHDKREGIQQRFMSGRSHCIVATIAFGMGIDKSDIRNVVH 300
            + E L  N I+A +YHAG+  D+R  +Q+ F       +VAT+AFGMGI+K ++R VVH
Sbjct: 254 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313

Query: 301 FDLPKSIENYSQEIGRAGRDGQPSDCLVLANRDSLNVLENFV 342
           FD+P++IE+Y QE GRAGRDG P++ ++L +   +N L   +
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML 355