Pairwise Alignments

Query, 441 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  250 bits (638), Expect = 7e-71
 Identities = 142/355 (40%), Positives = 207/355 (58%), Gaps = 25/355 (7%)

Query: 98  FDFHTLPFDVARVQVTLGRAFGMARLR------GKGYTAVDEPEHELLGDSRPIRELRKL 151
           +DF   PF   R+  T+ RA    RL        +           ++G++  I+ LR  
Sbjct: 98  YDFIEKPFAPERLIDTVHRAIEKRRLTLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDT 157

Query: 152 LSKLAPTESPVLIRGDSGTGKELVAKTLHRQSQRHAKPFVAINCGAIPEHLIQSELFGHE 211
           ++++A T++ +L+ G++GTGKELVA++LH QS R  + FVAINCGA+PE+LI+SEL+GHE
Sbjct: 158 IAQVADTQADILLFGETGTGKELVARSLHEQSSRREQNFVAINCGAVPENLIESELYGHE 217

Query: 212 KGAFTGAHQRKIGRIEAANGGTLFLDEIGDLPMELQANLLRFLQEKQIERVGGSQPIPVD 271
           KGAFTGA  R++G+ E A GGTLFLDEI  +PM+ Q  LLR LQE+ IER+G ++ IP+D
Sbjct: 218 KGAFTGADSRRVGKFEHAQGGTLFLDEIESMPMQAQIRLLRVLQERVIERIGSNELIPLD 277

Query: 272 VRVLAATHVDLEAAVEKGTFREDLYYRLNVLQVVTAPLRERHGDIAMLANHFSRFYSQET 331
           +RV+AAT +DL+ A  +G FR+DLYYRLN++ +   PLRER  DI  L +HF    +   
Sbjct: 278 IRVIAATKIDLKQAAAEGKFRQDLYYRLNIVTLTIPPLRERREDIPALFHHFLLVAAARY 337

Query: 332 GRRPRSFSDDALVAMGEHAWPGNVRELANRVRRGLVL------AEGRQIEAVDLGLQGQQ 385
           G+   + +   + ++  H WPGNVREL N   R ++L      AE  + ++  LGL  Q 
Sbjct: 338 GKAATALTASDVQSLLSHDWPGNVRELRNAAERYVLLGKLAQFAESHEPKSKLLGLNEQV 397

Query: 386 AISPPMATLEDYKHRAERQALCDVLNRHSDNLSVAARVLGVSRPTFYRLLHKHQI 440
           A               E+  L   L     ++      L + R T Y  + K+Q+
Sbjct: 398 A-------------EFEKSLLEQTLIECGGSIKATMERLHLPRKTLYDKMQKYQL 439