Pairwise Alignments

Query, 441 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  261 bits (668), Expect = 2e-74
 Identities = 151/358 (42%), Positives = 214/358 (59%), Gaps = 16/358 (4%)

Query: 98  FDFHTLPFDVARVQVTLGRAFGMARLRGKGYTAVDEP------EHELLGDSRPIRELRKL 151
           FD+ T PF    + +++  A  ++R+  + Y A+          H+++G S+ IRE+  +
Sbjct: 100 FDYITKPFSNDELLLSVQNAAELSRVH-RQYRALRANLEERYGTHQIIGRSKAIREVLDM 158

Query: 152 LSKLAPTESPVLIRGDSGTGKELVAKTLHRQSQRHAKPFVAINCGAIPEHLIQSELFGHE 211
           + + AP+ S VLI G+SGTGKELVA+ +H  S R++ PFV++NC A+   +++SELFGHE
Sbjct: 159 VDRAAPSRSTVLITGESGTGKELVARAIHFSSPRNSGPFVSVNCMALNPGVLESELFGHE 218

Query: 212 KGAFTGAHQRKIGRIEAANGGTLFLDEIGDLPMELQANLLRFLQEKQIERVGGSQPIPVD 271
           KG+FTGA   + GR E A+GGTLFLDEIG+L  ELQ  LLR LQE++ ERVGG   I VD
Sbjct: 219 KGSFTGAMAMRRGRFEQADGGTLFLDEIGELTPELQVKLLRVLQERRFERVGGGDEIEVD 278

Query: 272 VRVLAATHVDLEAAVEKGTFREDLYYRLNVLQVVTAPLRERHGDIAMLANHFSRFYSQET 331
           +RV+AAT+ DL+  VE GTFREDLYYRLNV+ V   PLRER  DI +L  HF    +++ 
Sbjct: 279 IRVVAATNKDLQKEVENGTFREDLYYRLNVVHVALPPLRERREDIPLLVGHFVEKLARDN 338

Query: 332 GRRPRSFSDDALVAMGEHAWPGNVRELANRVRRGLVLAEGRQIEAVDL---------GLQ 382
           G +P++F+ +A   +  + WPGN+R+L N V R LVL     +   DL          L+
Sbjct: 339 GMKPKTFTPEAHDYLTGYEWPGNIRQLQNVVERCLVLVASDTVGVDDLPPEIRDEESQLK 398

Query: 383 GQQAISPPMATLEDYKHRAERQALCDVLNRHSDNLSVAARVLGVSRPTFYRLLHKHQI 440
               + P    L D   + E   +   L R       AA +LG+S+      L K+ I
Sbjct: 399 SAVDLLPVRLDLADTLEKIEAALIRRALVRAEFVQVKAAELLGISKSLLQYKLKKYGI 456