Pairwise Alignments

Query, 355 a.a., cobalamin biosynthesis protein CobW from Pseudomonas simiae WCS417

Subject, 380 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  175 bits (444), Expect = 2e-48
 Identities = 117/386 (30%), Positives = 184/386 (47%), Gaps = 72/386 (18%)

Query: 7   LPVTIVTGFLGSGKTTLLRHMLDNAQGRRIAVIVNEFGELGIDGEILKQCSIGCTEEEAN 66
           LPVTI+TGFLGSGKTTLL H+L N QG + AV+VNEFGE+GID E++    +  +E+   
Sbjct: 19  LPVTIITGFLGSGKTTLLNHILTNQQGVKTAVLVNEFGEIGIDNELI----VSTSED--- 71

Query: 67  GRVYELANGCLCCTVQEEFFPVMRELVARRGDLDHILIETSGLALPKPLVQAFQWPEIRS 126
             + EL+NGC+CCT+  +    +  ++ R   +D++++ET+GLA P P+   F   E+R 
Sbjct: 72  --MVELSNGCICCTINSDLMDAVYRVLERPEKIDYLVVETTGLADPLPVALTFLGSELRD 129

Query: 127 ACTVDAVITVVDSPAVAAGTFAAFPDQVDAQRKLDPNLDHESPLHELFADQLASADLVIL 186
              +D+++TVVD+   +   F +                      +   +QL   D+++L
Sbjct: 130 LTRLDSIVTVVDAENYSLDLFNS----------------------QAAYNQLLYGDIILL 167

Query: 187 NKSDLISPEDLARVRLEVAEELPPAVKIIEASSGRLPLDVLIGLGA-GSEEHIDGR---- 241
           NK DL+S   L  +  ++  E+    +++  +  ++PL +++ +    S+ + D R    
Sbjct: 168 NKCDLVSESRLQELEAKI-REIKADARLLRTTQAQVPLPLILSVALFESDRYFDSRDHSD 226

Query: 242 -----------------HSHHDH----HHDGEDDHDHDH-----------DAFDSISIDL 269
                            H+HHDH    H  G  +HDHDH           D F S+S   
Sbjct: 227 CDHDHGHCTHEAHDHHEHNHHDHSACDHDHGHCEHDHDHHHEHAANHLEIDGFTSLSFQS 286

Query: 270 PQADEALLLDGLTQLVVQHGILRVKGFAAIPNKPMRLLIQGVGTRFDKHFDRAWGPDEAR 329
            +      L       +   + R KG         R +    G RF        GP   +
Sbjct: 287 DRPFAIRKLQHFLDNQLPTSVFRAKGILWFDESAKRHIFHLSGKRFSIDDSEWTGP---K 343

Query: 330 ITRLVLIGQDLDAAGLEAQLRAALSV 355
             +LVLIGQ LD A L+ QL A L++
Sbjct: 344 RNQLVLIGQGLDHAELQQQLEACLTL 369