Pairwise Alignments

Query, 1236 a.a., methionine synthase from Pseudomonas simiae WCS417

Subject, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 1575 bits (4078), Expect = 0.0
 Identities = 796/1228 (64%), Positives = 963/1228 (78%), Gaps = 14/1228 (1%)

Query: 9    QALHQALKERILILDGGMGTMIQSYKLEENDYRGKRFADWPSDVKGNNDLLVITRPDVIG 68
            Q L Q LK+RIL++DGGMGTMIQSYKL+E DYRG RF DW  D+KGNNDLLV+T+P +I 
Sbjct: 7    QQLEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIK 66

Query: 69   GIEKAYLDAGADILETNTFNATRISMADYGMEALAFELNVEGARLARKIADAKTAETPDK 128
             I  AYL+AGADILETNTFN+T I+MADY M++L+ E+N   A+LAR++AD  TA+ P +
Sbjct: 67   EIHSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSR 126

Query: 129  PRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADLILIETIFD 188
            PR+VAGVLGPT+RTCS+SPDVN+PG+RNVTFD LVE Y+E+T+ LI+GG+DLILIETIFD
Sbjct: 127  PRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFD 186

Query: 189  TLNAKAAIFAVQGVFEELNIELPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPISVGL 248
            TLNAKA  FAV  VFEEL I LP+MISGTITDASGRTLSGQTTEAF+N++ H +PIS GL
Sbjct: 187  TLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFGL 246

Query: 249  NCALGASELRPYLEELSNKANTHVSAHPNAGLPNEFGEYDELPSQTAKVIEEFAQSGFLN 308
            NCALG  ELR Y+EELS  +  +VSAHPNAGLPN FGEYD    + A+ I E+AQ+GFLN
Sbjct: 247  NCALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQAGFLN 306

Query: 309  IVGGCCGTTPGHIEAIAKAVAGYAPRQIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNI 368
            +VGGCCGTTP HI AIAKAV G  PR +PD+   CRLSGLEP  I   +LFVNVGERTN+
Sbjct: 307  LVGGCCGTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVGERTNV 366

Query: 369  TGSAKFARLIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFLNLIAGEPD 428
            TGSA+F RLI+E+ Y EAL+VA +QVE GAQ+IDINMDEGMLD++  MV FLNL A EP+
Sbjct: 367  TGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEPE 426

Query: 429  ISRVPIMIDSSKWDVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYGAAVVVMAF 488
            IS+VP+M+DSSKW+VIEAGLKCIQGKGIVNSIS+KEG E+FI  AKL +RYGAAV+VMAF
Sbjct: 427  ISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIVMAF 486

Query: 489  DEAGQADTEARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFINA 548
            DE GQADT  RK EIC+R+Y ILV+EVGFPPEDIIFDPNIFAVATGI+EHNNYA+DFINA
Sbjct: 487  DEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDFINA 546

Query: 549  CAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRNGLTMGIVNAGQLEIY 608
             A I+ ELP+A+ SGGVSNVSFSFRGNN VREAIH+VFL +  ++G+ MGIVNAGQLEIY
Sbjct: 547  VADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQLEIY 606

Query: 609  DQIPAELRDAVEDVVLNRTPDGTDALLAIADKYKGD--GSVKEAETEEWRGWDVNKRLEH 666
            D +P +LR+AVEDV+LNR  DGT+ LL IA+ Y+ +  G  ++A   EWR W V KRLEH
Sbjct: 607  DNVPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWPVAKRLEH 666

Query: 667  ALVKGITTHIVEDTEESRLSFARPIEVIEGPLMSGMNIVGDLFGAGKMFLPQVVKSARVM 726
            ALVKGIT  IV+DTEE+R   ++P+EVIEGPLM GMN+VGDLFG GKMFLPQVVKSARVM
Sbjct: 667  ALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVM 726

Query: 727  KQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMV 786
            KQAVA+L PFI  +K     + GKIL+ATVKGDVHDIGKNIVGVVL CN ++I+DLGVMV
Sbjct: 727  KQAVAYLEPFINAQKSGS-TSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIIDLGVMV 785

Query: 787  PAEKILQVAKEQKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAV 846
            P E+IL+VA+EQ  DIIGLSGLITPSLDEMVHVA+EM+RQ F LPL+IGGATTSKAHTAV
Sbjct: 786  PCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSKAHTAV 845

Query: 847  KIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVERTREEYVEVRERTSNRSARTER 906
            KIE  Y +  VVYV +ASRAVGV T LLS E + GF+ER   +Y   R++ + ++ ++  
Sbjct: 846  KIEQNY-HAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQHARKTPKSRP 904

Query: 907  LSYPAAIAKKPQFDWSTYSPVVPTFTGAKVLDNIDLKVLAEYIDWTPFFISWDLAGKFPR 966
            ++   A A K   DW+ Y+P  P   G  V +NI L  L  YIDWTPFF++W L GK+P 
Sbjct: 905  VTLEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFMTWSLMGKYPA 964

Query: 967  ILTDEVVGEAATALYADAQEMLKKLIDEKLISARAVFGFWPTNQVQDDDLEVYGDDG--Q 1024
            IL  E VGE A  L+ DA  +L K+  E L+ A  +   +P   V  DD+EVY D+   Q
Sbjct: 965  ILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASV-GDDIEVYSDESRTQ 1023

Query: 1025 PIAKLHHLRQQIIKTDGKPNFSLADFVAPKDSGVTDYIGGFITTAGIGAEEVAKAYQDAG 1084
                L++LRQQ  K  G  N+ L+D+VAPK+SG  D+IG F  T GIG   +A AY+  G
Sbjct: 1024 VAHVLYNLRQQTEKPKG-ANYCLSDYVAPKESGKRDWIGAFAVTGGIGERALADAYKAQG 1082

Query: 1085 DDYNSIMVKALADRLAEACAEWLHQQVRKEHWGYAKDEQLDNEALIKEQYSGIRPAPGYP 1144
            DDYN+IM++A+ADRLAEA AE+LH++VRKE WGYA DE L N+ LI+E+Y GIRPAPGYP
Sbjct: 1083 DDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQGIRPAPGYP 1142

Query: 1145 ACPDHTEKAQLFQLLDPEAREMHAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYFAVGK 1204
            ACP+HTEKA L+Q+L+ E         G+ LT  YAM+P A+VSGWYF+HP ++YFAV +
Sbjct: 1143 ACPEHTEKATLWQMLNVEE------TIGMSLTTSYAMWPGASVSGWYFSHPDSRYFAVAQ 1196

Query: 1205 VDKDQVASYTARKGQDLSVTERWLAPNL 1232
            +  DQ+ SY  RKG  L   E+WLAPNL
Sbjct: 1197 IQPDQLHSYAERKGWRLEEAEKWLAPNL 1224