Pairwise Alignments

Query, 355 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 26/269 (9%)

Query: 11  LLGSAYGAMAHATSVVFLNPGMSTETFWVSYAQFMQAGAKDLGLHLRVRYSERDTRNTLN 70
           LL ++   +A A   V +        F+V+     +A AK+LG +L V  S+ D    L+
Sbjct: 14  LLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIVLDSQNDPSKELS 73

Query: 71  QAREALQGSERPDYLVLVN--EQYVAPQILRMAQGSGVKLLIVNNALTADQVQLLNARND 128
              +    + R    +L+N  +       +R+A  S + +L ++   +  +V        
Sbjct: 74  NVEDL---TVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGEVV------- 123

Query: 129 ADVMGSMVANDEQAGYLMLTDLLRQHGPAKPGESIDLLAFSGTKTTPAAQLREKGLRRAL 188
           + +    V   E AG+ +          AK G    ++   G   T AA+ R +G   A+
Sbjct: 124 SHIASDNVVGGEMAGHFI---------EAKIGSDAKVIQLEGIAGTSAARERGEGFMNAV 174

Query: 189 AEHPEVRLRQLVSGEWSRQRAFEQAVLLFKRYPQTALVWSANDEMALGAMQALQDSGRVP 248
            +  +++L      ++ R +       L    P    V++ NDEMALGA++A+Q SG+  
Sbjct: 175 -KGSKMQLLASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGK-- 231

Query: 249 GQEVLFSAVNSSPQILQARLDGRLSTLVA 277
              V+    + +   + A   G+L+  VA
Sbjct: 232 --SVMIVGFDGTDDGIAAVERGQLAATVA 258